Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco05g1614 | ATGGAGAGGCTGGCGGAGGTGAGCGAACCAGAGATAAGAATAGACTTTGCTCTCAACTGCAAATGCCGAGCCACCGTGAGTCTCCGGTCTCTATGCGCCGCCTCGCCGCTGGCCTTCAAGGTCCAGACCTCTTCCCCGTGCAAGTTCCTCGTTAACCCTCCCTCCGGCGTCATCGCTCCTCTCTCTCACGCCACCTTCCGAGTCATCCTCAAGCCTCAGTCTCAGCTTCCCCCAACCTTCCCTCGCTCCCCCTCCGATCGCTTCCTTGTTAAAATCGCCCAATTCCTCCCCAATACCTCCAATCCCATTCCCTCTCACGCCATTAACTCATGGTTCTCCTCTCTCCCGTCCACCGTTTCCACTCAGAATCTTAAACTCAAGGTCGCCTTCGTCGGCCCACTCCTTCTCCGCCACGCCGTCGCAAGTGGTGATTTGGATGCTGTCAGGAACCTCATCAAACGGCAGAGATCCTTACTCACCGATTTGTCGCCCAATGAAGCTGAGTCGCTCCTCCGAGTCGCCACCGAGTTGGTTTATCCCGACAGCATGGTTAACTTGCTACTGGAAGCTGGGCTGAGAGTGGAGGAGGAATTGGGATCTGGTAACGTGGACCCGAGGTGGGCTTCGAAGGGATGGGATGAGTTACACGTGGCGGCGGCTTTTGACCGGACGGATGATGTTCTGAGTTTGTTAAAGACGAACCCGTCGGGGCCGTTGGATCCCAGAGATCACACGGGCAGTACCCCTTTGCATTTGGCGGCGGATAAGGGAAATATCAAGAGCGCGCGCTTGCTGGTGGAAGGCGGGGCGAATGTGAATGCTCGGTGTAACGATGGTCGCACGCCGTTGCACAGAGCGGTGGCGAATGGTGACCGTAGAATGGTGGAAATGCTGGTTGAGATGAGCGCTGACCCAACTATAACCGACGATCGTGACCGTTCAGCCCTTAACATTGCCAGTGATGAAGGACATAAAAAGATAGAGGAAATAATGGAGCAAGGAGAAGAAGTGCTAACGGCGGCGAGGCATGGGGACGTGAAGAAACTGGAGACACTGTTGAAGAGAGGAGCGAGTTTACAGTACCGTGATCAGTATGGTTTAACAGCACTTCATGCTGCAGCCATGAAAGGGCACAAGGAGATGGTATCGATGCTGACGGAAACAGGGTTGGACTTGGAATGTGAGGATGGGGAAGGTCACGCACCGCTGCATATGGCGGTGGAGAGTGGTGACCAGGAGACTATACAAGTTTTAGTGAACAAGGGTGTGAATGTAAATGCTGTCAATAAGAAGGGTGCCACCCCTTTGTACATGGCTAGAATTTTGGGATACGATGCCATAGCTGAGTTTCTTGTCAGCAAGGGAGCAATGTCCTGTTTTCCTGTAATTTCATGGTAA | 1398 | 0.5358 | MERLAEVSEPEIRIDFALNCKCRATVSLRSLCAASPLAFKVQTSSPCKFLVNPPSGVIAPLSHATFRVILKPQSQLPPTFPRSPSDRFLVKIAQFLPNTSNPIPSHAINSWFSSLPSTVSTQNLKLKVAFVGPLLLRHAVASGDLDAVRNLIKRQRSLLTDLSPNEAESLLRVATELVYPDSMVNLLLEAGLRVEEELGSGNVDPRWASKGWDELHVAAAFDRTDDVLSLLKTNPSGPLDPRDHTGSTPLHLAADKGNIKSARLLVEGGANVNARCNDGRTPLHRAVANGDRRMVEMLVEMSADPTITDDRDRSALNIASDEGHKKIEEIMEQGEEVLTAARHGDVKKLETLLKRGASLQYRDQYGLTALHAAAMKGHKEMVSMLTETGLDLECEDGEGHAPLHMAVESGDQETIQVLVNKGVNVNAVNKKGATPLYMARILGYDAIAEFLVSKGAMSCFPVISW | 465 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco05g1614 | 465 | ProSiteProfiles | Ankyrin repeat region circular profile. | 365 | 396 | - | - | |
| Acco05g1614 | 465 | SUPERFAMILY | PapD-like | 11 | 135 | IPR008962 | - | |
| Acco05g1614 | 465 | Gene3D | - | 134 | 332 | IPR036770 | - | |
| Acco05g1614 | 465 | ProSiteProfiles | Ankyrin repeat profile. | 365 | 397 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | SMART | ANK_2a | 365 | 394 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | SMART | ANK_2a | 131 | 160 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | SMART | ANK_2a | 398 | 427 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | SMART | ANK_2a | 245 | 274 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | SMART | ANK_2a | 278 | 307 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | SMART | ANK_2a | 431 | 461 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | SMART | ANK_2a | 333 | 361 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | PRINTS | Ankyrin repeat signature | 414 | 428 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | PRINTS | Ankyrin repeat signature | 366 | 381 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | ProSiteProfiles | Ankyrin repeat region circular profile. | 431 | 456 | - | - | |
| Acco05g1614 | 465 | ProSiteProfiles | Ankyrin repeat profile. | 245 | 277 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | ProSiteProfiles | Ankyrin repeat profile. | 278 | 310 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | ProSiteProfiles | Ankyrin repeat profile. | 398 | 430 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | Pfam | MSP (Major sperm protein) domain | 35 | 99 | IPR000535 | - | |
| Acco05g1614 | 465 | ProSiteProfiles | Ankyrin repeat region circular profile. | 398 | 430 | - | - | |
| Acco05g1614 | 465 | SUPERFAMILY | Ankyrin repeat | 136 | 456 | IPR036770 | - | |
| Acco05g1614 | 465 | Gene3D | - | 333 | 459 | IPR036770 | - | |
| Acco05g1614 | 465 | ProSiteProfiles | Major sperm protein (MSP) domain profile. | 5 | 129 | IPR000535 | - | |
| Acco05g1614 | 465 | ProSiteProfiles | Ankyrin repeat profile. | 431 | 456 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | Pfam | Ankyrin repeats (3 copies) | 398 | 456 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | Pfam | Ankyrin repeats (3 copies) | 215 | 309 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | ProSiteProfiles | Ankyrin repeat region circular profile. | 278 | 310 | - | - | |
| Acco05g1614 | 465 | Gene3D | Immunoglobulins | 2 | 133 | IPR013783 | - | |
| Acco05g1614 | 465 | Pfam | Ankyrin repeats (many copies) | 339 | 385 | IPR002110 | GO:0005515 | |
| Acco05g1614 | 465 | ProSiteProfiles | Ankyrin repeat region circular profile. | 245 | 275 | - | - | |
| Acco05g1614 | 465 | PANTHER | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN | 136 | 327 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco05g1614 | 265 | 454 | Ion Channels | AT2G26650 | 28.125 | 3.07e-10 | 60.5 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Acco05g1614 | 05 | 32546677 | 32548290 | Acco05g1614 | 05 | 32546677 | 32548290 | ECH |