Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1613 ATGAAAAGAAACTGGAATTTCAATCGATACAGGGATCTCCGGGGATTTCTTCGCTCTTTGGTGGTGTGGCTGCTCTTTCAGAGCTTGCTGGGTCTTTGTTGCTCTTTAAATGATGAAGGTAAAGCGCTCTTGAAGTTGAGGCAAAGGATAGTGAGTGACCCCTTTGGTGCTTTGTCAAATTGGATTGATGAAGAAGGGGAAGTTGACCCGTGCAATTGGGGCCGAGTTCAGTGCGTAGATGGAAGAGTGGTTGTCTTGAATTTGAAAGATCTTTGCCTTGGAGGAACTCTGGCACCTGAGCTTGCAAACCTTGTTCTTATAAAGTCCATTATTCTGCGAAACAATTCTTTCCATGGGATCATCCCGGAAGAAATTGCCAAATTGAAAGAGTTGGAGGTTTTGGATTTGGGATACAACAATTTCAGTGGATCTCTACCAGCAGATCTTGGGAGTAACATCTCTCTAGCCATCCTTTTGCTGGACAACAATGAGCTTCTTGGTGGGTTCTCTCCCGAAATTAATGAACTGACGATGCTTTCTGAAAGTCAAGTGGATGAAAACCAGCTAACTAATGTAGATAAAGTGCCATCTTGTGCAAGCAGATCCATTCCACAGAATGTGGACCAAGACAGTGCAGCTCTGCGAAGACTACTGCAAAGGGGTCCTACAAGTCCTTATGATCGTTCTAGATCTCTGTCTCCGTATCCGTCTCCATCTCGACCCCCTTCTCCCTCCCCTTCAGCAGTACCACCAGATGGAAATACTTCTGCATCTCCTTCTCCAAAAATAACTGATACAGGATCTAAAAGTGTCTCAAAAAGTAATCGTGCTGCAATTTTGGCTGGAGTTGGTGGTGGCCTATTTCTTCTTATTGTAATCGCCAGCATATACGTTTGTAGAACCAACAAAGTTACTACTGTCAAACCTTGGGCAACAGGACTAAGTGGACAGCTTCAGAAGGCATTTGTAACAGGTGTACCAAAGTTAAAAAGGTCTGAGCTCGAAGCAGCATGTGAAGATTTTAGCAATGTAATTGGTACGTCACCGATTGGAACAGTGTACAAAGGGACTTTATCTAGCGGAGTTGAAATTGCTGTTGCATCTGTGACTGTGACATCGTTGGATGCTTGGTCAAAGACTTTAGAAGTACAATTTAGGAAAAAGATTGATATGTTATCAAAAGTGAATCACAAGAATTTTGTCAACCTACTTGGATATTGCGAGGAAGAGGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCACCTAATGGAACACTCTTTGAGCATTTACACATAAAAGAAGCTGAGCACTTGGATTGGAAAACAAGACTTAGAATTGCAATGGGCATGGCATACTGCCTGCAATACATGCACCAGCTAGACCCTCCTGTAGCCATCAGCAATATGAACTCTAACTCTATCTTTCTTACAGAGGACTATGCTGCGAAAATCGCAGATATGAGTTTCTCATATGAAATAGCTTCATCTGAGATGAAGACTACCAAGGGCAGAAAACAATTTGATAATAATCCACTAGCAAGTCAACAAAGCGACGTTTATGAATTTGGTGTTATACTATTCGAAATGGTAACATCCAGAGTCCCTTATTCAGTTGATAACGCCTCACATGAAAACTGGGCATCAGATTATTTACAAGGAGACCGTCCCCTGAGGGAAATGGTGGATCCAACTCTAGCCTCTTTCGACAAACAGAAGCTAGAACAAGTTGCTGAACTGATCAAATCTTGTGTTGATCCTGATCCAAAGCAAAGACCAAGTATGAAAGAAGTTAGTGTGAGGCTGAGGGAAATAACAAACATGACACCTGATGCAGCAGTACCAAGGCTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTTGTTCAGCAGATGGAAGCTAA 1902 0.4259 MKRNWNFNRYRDLRGFLRSLVVWLLFQSLLGLCCSLNDEGKALLKLRQRIVSDPFGALSNWIDEEGEVDPCNWGRVQCVDGRVVVLNLKDLCLGGTLAPELANLVLIKSIILRNNSFHGIIPEEIAKLKELEVLDLGYNNFSGSLPADLGSNISLAILLLDNNELLGGFSPEINELTMLSESQVDENQLTNVDKVPSCASRSIPQNVDQDSAALRRLLQRGPTSPYDRSRSLSPYPSPSRPPSPSPSAVPPDGNTSASPSPKITDTGSKSVSKSNRAAILAGVGGGLFLLIVIASIYVCRTNKVTTVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPIGTVYKGTLSSGVEIAVASVTVTSLDAWSKTLEVQFRKKIDMLSKVNHKNFVNLLGYCEEEEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWKTRLRIAMGMAYCLQYMHQLDPPVAISNMNSNSIFLTEDYAAKIADMSFSYEIASSEMKTTKGRKQFDNNPLASQQSDVYEFGVILFEMVTSRVPYSVDNASHENWASDYLQGDRPLREMVDPTLASFDKQKLEQVAELIKSCVDPDPKQRPSMKEVSVRLREITNMTPDAAVPRLSPLWWAELEICSADGS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1613 633 MobiDBLite consensus disorder prediction 250 271 - -
Acco05g1613 633 FunFam Inactive receptor-like serine/threonine-protein kinase 313 421 - -
Acco05g1613 633 SUPERFAMILY L domain-like 37 194 - -
Acco05g1613 633 Gene3D Transferase(Phosphotransferase) domain 1 422 614 - -
Acco05g1613 633 ProSiteProfiles Protein kinase domain profile. 339 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1613 633 MobiDBLite consensus disorder prediction 219 271 - -
Acco05g1613 633 FunFam Nuclear pore complex protein NUP107 36 195 - -
Acco05g1613 633 SUPERFAMILY Protein kinase-like (PK-like) 322 602 IPR011009 -
Acco05g1613 633 Gene3D Phosphorylase Kinase; domain 1 311 421 - -
Acco05g1613 633 PANTHER PROTEIN MALE DISCOVERER 2 20 630 - -
Acco05g1613 633 Gene3D Ribonuclease Inhibitor 35 218 IPR032675 -
Acco05g1613 633 Pfam Protein tyrosine and serine/threonine kinase 342 600 IPR001245 GO:0004672|GO:0006468
Acco05g1613 633 MobiDBLite consensus disorder prediction 235 249 - -
Acco05g1613 633 Pfam Leucine rich repeat N-terminal domain 37 78 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1613 Acco-ChrAcco05 32532718 32536056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1613 23 604 Receptor kinase-like Gene Family AT5G16000 26.699 2.11e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Acco05g1613 PK_Tyr_Ser-Thr 5.7e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1613 05 32532718 32536056 Acco05g1613 05 32532718 32536056 CCT