Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1605 ATGCATTCACTTCACAGGTCGCTGGAATTGACAACACATTCCAAAGAAAATTTGACTGAGAGGAGTATTTGGAAAGAGCTCGGGAGCGTGAGAGGCAGGAAGAGGAGGCTCGATCTAGACCTAAATGGATTGCATGTCAAGCCAATTGTTTCTAGATTTTCTACATTCACAGCTGAAGATGGCAGTGAAATAAATGTTGGTGACATAGTTTATGAGCCCCCGAGAGATGGTCCAATGTTATGGGAGATAGGCATTCCTGATCGCTCTGCTGCTGAATTCTTTGTTCCTGATCCTAATCCCTTGTACATTAACAAGCTCTATGTCAACCATCCAGATAATTGA 342 0.4298 MHSLHRSLELTTHSKENLTERSIWKELGSVRGRKRRLDLDLNGLHVKPIVSRFSTFTAEDGSEINVGDIVYEPPRDGPMLWEIGIPDRSAAEFFVPDPNPLYINKLYVNHPDN 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1605 113 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 57 111 - -
Acco05g1605 113 SUPERFAMILY Galactose-binding domain-like 76 112 IPR008979 -
Acco05g1605 113 Pfam Polysaccharide lyase family 4, domain III 80 112 IPR029411 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1605 Acco-ChrAcco05 32464839 32466514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1605 61 112 Polysaccharide Lyase AT4G24430 82.692 1.52e-26 100