Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1598 ATGGAAAATTTCTACTATTCTAGTTCTGGTTCTAGCAGCTGCTGGTGGCCTGTGCAGGCCACAAACAGTAGCAGTAATAACAATAACAATAATAATAATGTTCCTTCTCCTTTCTCAGTTCATCAGACTCCATTGTTGCCTCATCGAATCTCAGATTCTTGCTCTGTTCAGTTCTGTGATCATTTTCTTCATCATCCATGGCCTCCTGAAGAAGATAAAGCTTCTAGTGCTTCCAAAAGCCATAGCCAAGCTGAGAAACGCCGTAGGGACAGAATCAATGCCCAGCTTGCCTCTCTCAGAAAACTCATCCCCAAGTCCGATAAGATGGACAAGGCAGCATTACTTGGGAGTGTGATAGAGCAAGTGAAGGATCTGAAAAGAAAAGCCATGGACATAGGAACATCCTTCACAGTTCCTACAGAGATCGATGAAGTTTTAATAGACCAAGACGATGAAAACTCAAGCTCATCATTATCATCATCAAGCTCTATCATCAACAACAAGGTGAAAGGGAACAACAATAAGAACATAGTGATAAGAGCTTCTGTGTGCTGTGAGGATCGGCCGGAACTGTTCTCGGAACTCATCAAAGTTCTGAAAGGGCTGAAGCTCACGGCAGTGAAGGCTGACATAGCAAGTGTGGGAGGAAGAATCAAAAGCATATTGGTGCTCTGTTCTGAGGACAGTGATGATCGTGTTTGTGTCGCTACTCTGAAGCAGTCTCTTAAATCTGCTGTTACTAAAATTGCTGCCTCGTCTTCTTCAATGCCTTCTACTTGTCCTGCAAGAAGTAAGAGGCAGAGGTTTTTCTTGCCTTCATCTTGCCTCCATTGA 834 0.4341 MENFYYSSSGSSSCWWPVQATNSSSNNNNNNNNVPSPFSVHQTPLLPHRISDSCSVQFCDHFLHHPWPPEEDKASSASKSHSQAEKRRRDRINAQLASLRKLIPKSDKMDKAALLGSVIEQVKDLKRKAMDIGTSFTVPTEIDEVLIDQDDENSSSSLSSSSSIINNKVKGNNNKNIVIRASVCCEDRPELFSELIKVLKGLKLTAVKADIASVGGRIKSILVLCSEDSDDRVCVATLKQSLKSAVTKIAASSSSMPSTCPARSKRQRFFLPSSCLH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1598 277 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 125 IPR011598 GO:0046983
Acco05g1598 277 MobiDBLite consensus disorder prediction 69 90 - -
Acco05g1598 277 Pfam Helix-loop-helix DNA-binding domain 79 125 IPR011598 GO:0046983
Acco05g1598 277 SMART finulus 82 131 IPR011598 GO:0046983
Acco05g1598 277 CDD ACT_UUR-ACR-like 182 217 - -
Acco05g1598 277 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 128 IPR036638 GO:0046983
Acco05g1598 277 PANTHER TRANSCRIPTION FACTOR BHLH30 49 272 IPR045847 GO:0003700|GO:0006355
Acco05g1598 277 Gene3D - 70 132 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1598 Acco-ChrAcco05 32406394 32407449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1598 72 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 46.667 9.21e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco05g1598 HLH 3e-10 No_clan