Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1584 ATGGCCGTCTCCGATGTCGATGCCGTCATCGAGTTCCTGAGGAAGAATGGATTCTCAGAGGCCGAGTCTGCCCTCAAACAGGACATCATCGAAAAACGTGATCTTGGATCCTTTGACTACGAGAAATTCTTCTTTCCTATGGTGCCTCCGCCGCCGCCAATCAGGGTCCGATCGTTTTCCCGGCGGCTCCCTACTGACTGCTCCTCGGAAGAAGAGTTTGTGAGCTTGAGTTCTTCTACTTCTGATGTTTGTTCTTGTGAATTCATTAATCCATACGGAATCCGTTCATCGTCTCAGAAAGATTCTGAATCTTCATCTGATAGACTATCTCAATTTGAAACCGCACGAGATCACCATTTCGATATGCAAAATGAATATTGGTACAACGAGAAAGATGATGACAATTTCATGACTCCAAACTTTGAAGGGCCTGATTTTTTTAGCTCTCCGACTGACAAGTTCATTATGAGATCATCAGAAATGGACAATCAGCAAGAGAATCCTGAGAATCTGAATCATATCTCAGAAGGATTTCAATCAGAGGAAAATGGTGATTGTGTAGACAAGACATGCCTTCCCTTTAATGAGAAAGATCAGCTCAAAGCAAGATTATTGGAAAAGGAAATTCATCTGAATGATTCTCACTCGAAGGTTGCTGGAAAATTTTCTGGCTATGATTCTTCTGCTTTGGCAAATCGTATGGACCAAAAGCTTGACTTTTACACGAGCAATGATATTAGTAAAGGGAGTAAAGATTCCTATGACTTGACGATTGAAGTTGATGATGAAATCTACAGCAACTTGGTAGCTCGAGACGATAAAGCCGAAGAATTTCATGAATCAGATGATGCTGCAGATATCACTGATGATGAGCTGGTAAAGTACACTCCTGAGGATGACTATGAAGTATTTGACTTAAGAATTATTCATAGAAAAAACAGGACTGGTTTTGAAGAAAGCAAGGATTTTCCGATTGTACTAAATACAGTTATAGCTGGCAGATACTATATAACGGCTTATCTCGGTTCAGCAGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCAAACGGGCGTCGATGTTTGCTTGAAGATCATAAAAAATGACAAAGATTTCTTTGATCAAAGCTTAGATGAAATCAAACTTCTTAAACTTGTCAATAAGCATGACCCGGCTGATCGATTCCACATACTGCGTCTCTATGACTACTTCTATAATCAGGAACATCTATTCGTTGTTACTGAGCTTCTGCGAGCGAACTTATATGAATTTCAAAAATTCAACCAAGAATCTGGTGGCGAAGCATATTTTACAATGACGAGGTTGCAGCACATTACTCATCAATGTTTGGAGGCATTGCAATACTTGCATAGTTTAGGGATCATTCACTGTGACCTGAAACCAGAAAACATTCTGATAAAAAATTACAAAAGATGTGAAATCAAGGTCATTGATCTGGGAAGTAGTTGCTTTCAGACAGACATCTTGTGTCTATACGTGCAATCGCGATCGTACCGGGCTCCTGAAGTGATACTAGGCCTCCAATATGATGAGAAGATTGATATTTGGTCCCTTGGCTGCATCTTAGCCGAACTATTCTCCGGCGAAGTTCTCTTTCCAAACGATGGGGTCGTTATGATTCTTGCGCGCATGATTGGAATGCTTGGTCCTATTGATCTTGAGATGTTGGTCAAAGGACAAGAGTCTCACAAGTACTTCACCAAGGAATTTGATATTTATTATGTCAACGAGGAGACAGATCAAGTTGAGTATATAATTCCAGAAGAGTCATCGTTGGAGCAGCTTTTGCAGGTTACAGACGCTATGTTCATAGATTTTGTGAGATACTTGCTTAGTATAAACCCCAAAACAAGACCTACTGCAACACAGGCTTTGAGACATCCTTGGCTTTCTCTTATCTATAAGTCCAAGGACAATAATTAA 1944 0.4038 MAVSDVDAVIEFLRKNGFSEAESALKQDIIEKRDLGSFDYEKFFFPMVPPPPPIRVRSFSRRLPTDCSSEEEFVSLSSSTSDVCSCEFINPYGIRSSSQKDSESSSDRLSQFETARDHHFDMQNEYWYNEKDDDNFMTPNFEGPDFFSSPTDKFIMRSSEMDNQQENPENLNHISEGFQSEENGDCVDKTCLPFNEKDQLKARLLEKEIHLNDSHSKVAGKFSGYDSSALANRMDQKLDFYTSNDISKGSKDSYDLTIEVDDEIYSNLVARDDKAEEFHESDDAADITDDELVKYTPEDDYEVFDLRIIHRKNRTGFEESKDFPIVLNTVIAGRYYITAYLGSAAFSKVVQAHDLQTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADRFHILRLYDYFYNQEHLFVVTELLRANLYEFQKFNQESGGEAYFTMTRLQHITHQCLEALQYLHSLGIIHCDLKPENILIKNYKRCEIKVIDLGSSCFQTDILCLYVQSRSYRAPEVILGLQYDEKIDIWSLGCILAELFSGEVLFPNDGVVMILARMIGMLGPIDLEMLVKGQESHKYFTKEFDIYYVNEETDQVEYIIPEESSLEQLLQVTDAMFIDFVRYLLSINPKTRPTATQALRHPWLSLIYKSKDNN 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1584 647 ProSiteProfiles Protein kinase domain profile. 335 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1584 647 Gene3D Transferase(Phosphotransferase) domain 1 389 637 - -
Acco05g1584 647 CDD PKc_DYRK_like 335 637 - -
Acco05g1584 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Acco05g1584 647 SMART serkin_6 335 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1584 647 FunFam Putative serine/threonine-protein kinase dyrk2 329 416 - -
Acco05g1584 647 FunFam Serine/threonine-protein kinase ppk15 414 638 - -
Acco05g1584 647 Pfam Protein kinase domain 339 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1584 647 SUPERFAMILY Protein kinase-like (PK-like) 323 640 IPR011009 -
Acco05g1584 647 Gene3D Phosphorylase Kinase; domain 1 330 416 - -
Acco05g1584 647 PANTHER DUAL SPECIFICITY PROTEIN KINASE 97 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1584 Acco-ChrAcco05 32191617 32194710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1584 332 632 MAP Kinase Gene Family AT5G19010 32.399 2.50e-34 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Acco05g1584 Pkinase 1.8e-52 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1584 05 32191617 32194710 Acco05g1584 05 32191617 32194710 ECH