Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1578 ATGGGAGGCCACAGCCATCACGACCTAGAAGGAGCTCAAAACAATGAAGAGGGTCGCTTACAACTCACATTTGCGTTGAGGGACAAGAACAACGCGGACATATTAGAGTTTGATGAATCCTCAACTCCTAGAAAAATTCGAAGAACTCATGCTTTCAACTGCTTGATCGTGGATGATTCAACCATTTTTTACAACCATGGCAAGGACAGGTCCTTAGCTTTTGAAGAAGACGAAGACAACAATGGTAGCATTTCCCCAGCCAAACCTCCGATTGACAACCACCTATATGAAATAGCCATTTTTCATTTTTTGGCGGCGAAGAACTTGAGACTCACAGGCGGGAGCTCAGAAATGGCGATTAAGGCCAATAGAACGGTGGTTTCGGCTTGTCTTTTCTGGGTTTTCATTCTGTGCGCGACCATAGCATTCTTTCAGCTTAAACTGATAGAGAACGGAAGAGACAATTCATCTGACCACAAGGCCATCGAAACAGCGCATGGATCGGAAAACCCAGCGGAAGAGGATTTGGAGGGAGTCACTCACAAGGTGTTTTTTGATATAGAGATCGACGGGAAGCTTGCGGGTCGCATAGTCATGGCACTTTTTGGATCAGTGGTTCCAAAAACTGTAGAAAACTTTCGAGCACTCTGTACTGGAGAGAGAGGCGTGGGAAAAAGTGGGAAGCCTCTTCATTACAAAGGTAGCACATTCCATAGGATAATACCCAGCTTTATGGTCCAAGGGGGTGATTTCACCCGTGGTGATGGACGAGGGGGAGAATCAATCTATGGTTCTAAGTTTGCTGATGAAAACTTCAAAGTGAAGCATAATGGACCAGGATACTTGTCGATGGCGAATGCTGGAACAGACACAAACGGCTCACAATTTTTTATAACAACGGTCAAAACTAGCTGGTTGGACGGCCGGCATGTTGTATTTGGGAAGGTGCTTTCGGGGATGGACGTTGTCTACAAGATCGAAGCACAAGGAAGCGCAAATGGCGAGCCCAAAGGCAAGGTTCTTATACTTGACAGTGGGGAATTCACTTCATGA 1053 0.4587 MGGHSHHDLEGAQNNEEGRLQLTFALRDKNNADILEFDESSTPRKIRRTHAFNCLIVDDSTIFYNHGKDRSLAFEEDEDNNGSISPAKPPIDNHLYEIAIFHFLAAKNLRLTGGSSEMAIKANRTVVSACLFWVFILCATIAFFQLKLIENGRDNSSDHKAIETAHGSENPAEEDLEGVTHKVFFDIEIDGKLAGRIVMALFGSVVPKTVENFRALCTGERGVGKSGKPLHYKGSTFHRIIPSFMVQGGDFTRGDGRGGESIYGSKFADENFKVKHNGPGYLSMANAGTDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDVVYKIEAQGSANGEPKGKVLILDSGEFTS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1578 350 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 237 249 IPR002130 GO:0000413|GO:0003755
Acco05g1578 350 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 280 295 IPR002130 GO:0000413|GO:0003755
Acco05g1578 350 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 201 216 IPR002130 GO:0000413|GO:0003755
Acco05g1578 350 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 295 307 IPR002130 GO:0000413|GO:0003755
Acco05g1578 350 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 308 323 IPR002130 GO:0000413|GO:0003755
Acco05g1578 350 FunFam Peptidyl-prolyl cis-trans isomerase 177 349 - -
Acco05g1578 350 Gene3D - 171 350 IPR029000 -
Acco05g1578 350 SUPERFAMILY Cyclophilin-like 179 348 IPR029000 -
Acco05g1578 350 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 182 347 - -
Acco05g1578 350 CDD cyclophilin_ABH_like 181 346 - -
Acco05g1578 350 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 232 249 IPR020892 GO:0003755|GO:0006457
Acco05g1578 350 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 184 347 IPR002130 GO:0000413|GO:0003755
Acco05g1578 350 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 185 344 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1578 Acco-ChrAcco05 32095543 32099948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1578 195 327 U-box Gene Family AT5G67530 44.776 2.22e-25 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1578 05 32095543 32099948 Acco05g1578 05 32095543 32099948 ECH