Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1550 ATGGTTGGGAAACCCACTAAGGCCGAGAAGAAGATCGCTTACGATGCCAAATTGTGCAATCTTCTGGAGGATTACACCCAGATCCTTGTGGTGGAAGCCGACAACGTCGGATCCAACCAGCTTCAAAACATCAGAAAGGGTCTGCGTGGAGACTCGGTGGTGCTCATGGGCAAGAACACTATGATGAAGCGCTCTGTTAGGATTCATGCCGAGAAGACCGGCAACAATGTCTTCCTCAACCTTATCCCTCTGCTTCAGGGCAATGTCGGGTTAATTTTTACTAAAGGAGACCTGAAGGAGGTTAGCGAGGAGGTTGCCAAGTACAAGGTTGGAGCCCCTGCCCGTGTTGGTTTGGTTGCTCCCATTGATGTCGTTGTTCCTCCTGGCAACACAGGGCTTGATCCCTCTCAGACCTCTTTCTTCCAGGTGCTCAATATCCCCACCAAGATTAACAAGGGTACCGTCGAAATTATCACCCCTGTGGAACTTATTAAGAAGGGTGACAAGGTTGGCTCCTCAGAGGCTGCTCTGCTTGCTAAACTTGGGATAAGGCCCTTCTCCTACGGGCTTGTGGTCGTATCTGTTTATGATAACGGTTCAGTGTTCAGCCCTGAGGTTCTTGATCTCACTGAGGAGGATCTCATTGAGAAATTTGCTATTGGTGTTAGCCAGGTGACGTCAGTTGCTTTGGCCGCCTCCTACCCAACAATTGCAGCTGCACCACACATGTTCGCGAATGCCTACAAAAACGTTTTGTCTGTTTCAGTGGAAACTGCCTACTCTTACCCTCAGGCAGAGAAGGTTAAGGAGTACCTAGAGGATCCCAGCAAATTTGCTGTAGCTGCTGTTGCGGCAGCTCCAGTTGCAGATTCAGGTGCTGCTGCCCCGGCCGCAGAGGAGAAGGAGGAGCCAGCTGAAGAATCTGATGACGACATGGGCATCAGTTTGTTTGATGATTGA 960 0.5021 MVGKPTKAEKKIAYDAKLCNLLEDYTQILVVEADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHAEKTGNNVFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVVSVYDNGSVFSPEVLDLTEEDLIEKFAIGVSQVTSVALAASYPTIAAAPHMFANAYKNVLSVSVETAYSYPQAEKVKEYLEDPSKFAVAAVAAAPVADSGAAAPAAEEKEEPAEESDDDMGISLFDD 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1550 319 Pfam 60s Acidic ribosomal protein 234 317 - -
Acco05g1550 319 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Acco05g1550 319 CDD Ribosomal_P0_L10e 9 185 - -
Acco05g1550 319 MobiDBLite consensus disorder prediction 302 319 - -
Acco05g1550 319 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 304 - -
Acco05g1550 319 Gene3D - 6 209 IPR043141 -
Acco05g1550 319 FunFam 60S acidic ribosomal protein P0 113 186 - -
Acco05g1550 319 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Acco05g1550 319 PIRSF L10E 2 318 IPR030670 GO:0042254
Acco05g1550 319 Pfam Ribosomal protein L10 7 108 IPR001790 -
Acco05g1550 319 Gene3D - 114 185 IPR043164 -
Acco05g1550 319 MobiDBLite consensus disorder prediction 292 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1550 Acco-ChrAcco05 31752449 31754694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1550 1 317 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 81.761 0.0 504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1550 05 31752449 31754694 Acco05g1550 05 31752449 31754694 ECH