Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1545 ATGGTCGGTCTCGTGCGAGTGGCTACTATCCTGCCAGCTGGCAATGATAAGAAAAATGAGTTCAATATATTACGCCGCATGGACCCCACCACTTTCTCGTCTTCATCTTTCTCAACTAAACTTGATACCGCTTATAAATCCGTAATAATAATAAGTGTAGCCTTCATAATCACCCTCATCTCTAACTCTCATCATCGCTCTCTCTGTCTGTCACAACACCACCACTGGAGAAAAATGGAAGGGAAAGAAGAGGATGTTGCGTTGGGAGCGAACAAGTTCCCGGAGAGGCAGCCCATCGGGACGGCTGCTCAGAGCCAAGACGATGGGAAGGACTACCAGGAGCCACCACCGGCGCCACTGTTCGAACCATCTGAGTTGACGTCGTGGTCGTTCTACAGAGCCGGGATTGCCGAGTTCGTGGCCACTTTTCTGTTCCTGTACATCACCATCCTGACGGTTATGGGCTACAGTCGCTCTGACTCAACGTGCAAATCCGTCGGAACTCAAGGAATCGCTTGGGCTTTCGGCGGCATGATCTTCGCCCTTGTGTACTGCACAGCTGGAATTTCAGGTGGTCACATAAACCCGGCCGTGACTTTTGGGTTGTTCTTGGGGAGGAAGTTGTCGTTCACGAGGACAATATTCTACATCGTGATGCAGTGCTTGGGTGCGATCTGTGGTGCAGGTGTGGTGAAGGGTTTTGAGGGCAAGACATTATACGGGGACAAGGGCGGCGGTGTCAACTACGTGCACGACGGTTACACCAAAGGAGACGGCCTCGGTGCTGAGATTGTTGGCACCTTCATCCTTGTCTACACCGTCTTCTCCGCCACCGATGCCAAGCGTAGCGCTCGCGACTCGCACGTCCCCATTTTGGCACCGTTACCTATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACCATCCCCATCACCGGAACCGGCATCAACCCAGCTCGAAGTCTCGGAGCCGCCATCATCTTCAACAAACACCTTGGCTGGCATGAACACTGGATTTTCTGGGTGGGACCATTCATCGGAGCAGCACTCGCAGCACTGTACCACGTCGTGGTGATCAGGGCCATTCCCTTCAAGTCCAAGTGA 1104 0.529 MVGLVRVATILPAGNDKKNEFNILRRMDPTTFSSSSFSTKLDTAYKSVIIISVAFIITLISNSHHRSLCLSQHHHWRKMEGKEEDVALGANKFPERQPIGTAAQSQDDGKDYQEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGYSRSDSTCKSVGTQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLGRKLSFTRTIFYIVMQCLGAICGAGVVKGFEGKTLYGDKGGGVNYVHDGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKHLGWHEHWIFWVGPFIGAALAALYHVVVIRAIPFKSK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1545 367 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 91 363 IPR034294 -
Acco05g1545 367 CDD MIP 133 358 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g1545 367 Pfam Major intrinsic protein 125 355 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g1545 367 FunFam Probable aquaporin PIP1-2 118 367 - -
Acco05g1545 367 SUPERFAMILY Aquaporin-like 125 359 IPR023271 -
Acco05g1545 367 PRINTS Major intrinsic protein family signature 262 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g1545 367 PRINTS Major intrinsic protein family signature 212 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g1545 367 PRINTS Major intrinsic protein family signature 133 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g1545 367 PRINTS Major intrinsic protein family signature 175 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g1545 367 PRINTS Major intrinsic protein family signature 298 320 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g1545 367 PRINTS Major intrinsic protein family signature 338 358 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g1545 367 ProSitePatterns MIP family signature. 193 201 IPR022357 -
Acco05g1545 367 NCBIfam MIP family channel protein 137 355 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco05g1545 367 Gene3D Glycerol uptake facilitator protein. 118 365 IPR023271 -
Acco05g1545 367 MobiDBLite consensus disorder prediction 98 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1545 Acco-ChrAcco05 31695507 31697170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1545 79 367 Major Intrinsic Protein MIP AT4G23400 83.737 4.06e-167 466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1545 05 31695507 31697170 Acco05g1545 05 31695507 31697170 CCT
Acco05g1545 05 31695507 31697170 Acco05g1545 05 31695507 31697170 ECH