Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1542 ATGGAAGATGGTGTGTCAGGGTTTTGTATCAGAGCAGGAAGTTTTAGGAGAGGTGATAGTAATAATAATGGGAATAGTGGAAGTAGCGGGACTAAGTGTGGGCGTTGGAATCCGACAACAGAACAGGTTAAGCTTCTTACAGATTTGTTCATGTCTGGTCTGAGAACTCCAAGCACTGATCAGATTCAGAAGATTTCCACTGAGCTTAGCTATTATGGTAAGATTGAAAGCAAGAATGTGTTTTATTGGTTTCAGAACCATAAAGCCAGGGAGAGACAGAAGCGTCGTAAGGTCTCATTCCATGACAAGGATCTTGGTAACATTCGTCGTCAAAACTCTCTGTTATCTTCCACACAACAAAATTTTGGGGAGGTGGATCAAGTTCAAGAGCCAGAGAGACTGACAGAGACTCTTCAACTGTTTCCCTTAAACTCCATTGGTGAATCAGAAGAAGAGAAAGTGAGGGGACAAGCAAATAAATATGGGGATGATAATAACGGTACGATGTTTCAGTCGTCACTTCGGGAACATATGGATAGCCCAGCGTTGGACTTGCGCTTAAGCTTTCTGTAA 573 0.4241 MEDGVSGFCIRAGSFRRGDSNNNGNSGSSGTKCGRWNPTTEQVKLLTDLFMSGLRTPSTDQIQKISTELSYYGKIESKNVFYWFQNHKARERQKRRKVSFHDKDLGNIRRQNSLLSSTQQNFGEVDQVQEPERLTETLQLFPLNSIGESEEEKVRGQANKYGDDNNGTMFQSSLREHMDSPALDLRLSFL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1542 190 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 19 109 IPR044555 GO:0003700|GO:0099402
Acco05g1542 190 CDD homeodomain 35 95 IPR001356 GO:0003677
Acco05g1542 190 SMART HOX_1 31 98 IPR001356 GO:0003677
Acco05g1542 190 ProSiteProfiles 'Homeobox' domain profile. 29 94 IPR001356 GO:0003677
Acco05g1542 190 FunFam WUSCHEL-related homeobox 11 32 100 - -
Acco05g1542 190 Pfam Homeodomain 33 93 IPR001356 GO:0003677
Acco05g1542 190 SUPERFAMILY Homeodomain-like 34 97 IPR009057 -
Acco05g1542 190 Gene3D - 32 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1542 Acco-ChrAcco05 31676121 31676775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1542 17 190 Wox Gene Family AT3G11260 55.676 1.22e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco05g1542 Homeodomain 2.7e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1542 05 31676121 31676775 Acco05g1542 05 31676121 31676775 CCT
Acco05g1542 05 31676121 31676775 Acco05g1542 05 31676121 31676775 ECH