Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1540 ATGCCCTCTCCTTCTTCTTCTTCATTGACCCTCACTGTACTCTCCAAATGCACTGTTTACCCTAACCAGAAATCCACCATCTCAGACCTCAAGCTCTCCATCTCCGACCTTGCCATGCTCTCTTGTCACTACATCCAAAAAGGTTGTCTCTTTTCTCTCCCTTCTCTTCCCTTTCACTCTCTCCTCCCTCACCTCAAGTCCTCTCTCTCCTTCACTCTCTCTCACTTCCCTCCCCTCGCCGGTCGCTTCACTACCGATTCCCACGGCTACGTTTGCATCACCTGCAACGATGCCGGCGTCGATTTCCTCCACGCCACCGCCACTGGAAACTCAGTCCGCGACCTCTTGTCCCCACCCGATGTCCCAGGCTCTTTTAAGAACTTCTTCACCTTCGACAAAAAAGTCAGTTACACCGGCCACTTCAGCCCACTCTTGGCAGTTCAGGTCACTGAGCTCGCCGACGGCGTCTTCATCGGCTGCTCCATGAACCACGCCATCGCGGACGGCACGTCGTTCTGGAATTTCTTCAATACCTTCGCGGAAATATGCAGAGAGGCCACCAATAAAATCTCCCACATCCCCGATTTCCGTCGGGATTCGATTCTGATATCCAAAGCGGTGCTCGAGTTTCCGGAAGGTGGGCCCAAGATCACGTTCAACCCTGACGAGCCGTTAAGGGAGAGAATTTTCAGCTTCAGCAAAGAAGCCATAAAAAAACTGAAAGCCACCGTGAACAGCGAGAAAATCACAACTGATAGCGAGGTTAACGCCGTCGAGTTAATAGGGAATCAAAGCAACGATAGTTACCATAATGACAACAGAGGCAAAGTTAACGATGAGATATCGTCGTTTCAGTCACTTTGCGCGCTACTATGGCAATGCGTGACACGCGCGAGGAAGTTGCATCCGTCGAAAACGACAGTGTTTAAGATGGCAGTGAACTGTCGCATGAGGATAGAGCCTAAATTGGATCCGTACTATTTCGGGAACGCGATTCAGAGCATACCCACGTATGCCACGTCAGAGGACGTCGTGGGCAGGGGACTACGGTGGTGCGCGGAGGAGTTGAGCAAGAACGTGAAGGCGCACGATGACGCTATGGTGAGGAGATTCGTAGAGGATTGGGAGAAAAATCCGGGGTGCTTCCCGCTGGGGAATCCTGACGGCACATCGGTGACGATGGGGAGCTCGCCGAGATTTCCGATGTATGATAATGACTTTGGGTGGGGGAGGCCTGTGGCGGTTCGGAGCGGCGGAGGGAACAAGTTTGACGGGAAGATATCAGCGTTTCCGGGGAGGGAAGGAGGTGGGAGTGTGGACTTGGAGGTGTTGTTGGCGCCGGAGACGATGAAGGGGCTGGAATCGGACCCGGAGTTCATGGCGTACGCATCGAGTCTTGTGCCATGGATGATGATCGATGATATGCTTTAA 1431 0.529 MPSPSSSSLTLTVLSKCTVYPNQKSTISDLKLSISDLAMLSCHYIQKGCLFSLPSLPFHSLLPHLKSSLSFTLSHFPPLAGRFTTDSHGYVCITCNDAGVDFLHATATGNSVRDLLSPPDVPGSFKNFFTFDKKVSYTGHFSPLLAVQVTELADGVFIGCSMNHAIADGTSFWNFFNTFAEICREATNKISHIPDFRRDSILISKAVLEFPEGGPKITFNPDEPLRERIFSFSKEAIKKLKATVNSEKITTDSEVNAVELIGNQSNDSYHNDNRGKVNDEISSFQSLCALLWQCVTRARKLHPSKTTVFKMAVNCRMRIEPKLDPYYFGNAIQSIPTYATSEDVVGRGLRWCAEELSKNVKAHDDAMVRRFVEDWEKNPGCFPLGNPDGTSVTMGSSPRFPMYDNDFGWGRPVAVRSGGGNKFDGKISAFPGREGGGSVDLEVLLAPETMKGLESDPEFMAYASSLVPWMMIDDML 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1540 476 Gene3D - 213 455 IPR023213 -
Acco05g1540 476 Pfam Transferase family 10 460 - -
Acco05g1540 476 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 13 460 - -
Acco05g1540 476 Gene3D - 11 209 IPR023213 -
Acco05g1540 476 SUPERFAMILY CoA-dependent acyltransferases 62 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1540 Acco-ChrAcco05 31656440 31657870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1540 9 454 Monolignol Biosynthesis Gene Families AT5G48930 26.652 4.62e-31 122