Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1524 ATGGTGGTCACGGAGCAGTCTCATGTTGTTGATGTAGACAATGGTGGTCGGCGTAGCAGCTCCGTCGGTGACGGTGGCGATGGACGGCATCCGGACGCTGCCGACTGTGGAGATAAGGAGTTAAAATGCTCCGACGAGGTTTCTGATGCCGAGATTGTGCGAGTGCCGGAAAAAGAGAAGGGATCCCCTGCGTCGGAGTGTACGATGGAGGTGGATTTGGGGAATGTGGTGACTGAAACTAAGGTACATTTGGGTGAAACGAAGAGGGATTGTAGGATTTGCCATCTTAGTATGGATATGACTAATCATGAATCGGGGAGCATTGAGCTTGGATGTTCTTGCAAGGACGATTTGGTTGCTGCTCACAAGCAATGTGCTGAGGCCTGGTTCAAGATCAAGGGAAACAAAACCTGCGAAATCTGTGGATCAATTGCACGCAATGTAACTGGAGCTTTTGAAGTAGAAAATGTTGAACAATGGAACGAGTCAAATGATGCCAACATGGCAGCCCCAACTGGACCTGTATCCCACGGTGAACATAGAAGTTTCTGGAGGGGCCACAGATTCTTGAACTTCCTACTAGCGTGTATGGTTTTTGCCTTTGTCATATCTTGGCTTTTCCACTTCAATGTACCCTCATGA 642 0.4844 MVVTEQSHVVDVDNGGRRSSSVGDGGDGRHPDAADCGDKELKCSDEVSDAEIVRVPEKEKGSPASECTMEVDLGNVVTETKVHLGETKRDCRICHLSMDMTNHESGSIELGCSCKDDLVAAHKQCAEAWFKIKGNKTCEICGSIARNVTGAFEVENVEQWNESNDANMAAPTGPVSHGEHRSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1524 213 Pfam RING-variant domain 91 141 IPR011016 GO:0008270
Acco05g1524 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 150 IPR013083 -
Acco05g1524 213 MobiDBLite consensus disorder prediction 23 39 - -
Acco05g1524 213 SUPERFAMILY RING/U-box 88 144 - -
Acco05g1524 213 SMART ringv_2 90 142 IPR011016 GO:0008270
Acco05g1524 213 MobiDBLite consensus disorder prediction 1 39 - -
Acco05g1524 213 ProSiteProfiles Zinc finger RING-CH-type profile. 83 148 IPR011016 GO:0008270
Acco05g1524 213 PANTHER ZINC FINGER, RING-CH-TYPE 8 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1524 Acco-ChrAcco05 31394851 31397174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1524 37 213 C3H Transcription Factor Family AT5G05830 60.335 2.73e-68 206