Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1480 ATGGAAGGATCTCACCACTCCCATCCTCAACATCATCATCACTACTTGATGTGGCTGAAGAGGAAGCAAATGTTTAAGTCACATATTGAAGCAGCAGCTAAGTCATCGTCATTGGAAGAGAGGGCTTTTGCAGAAGACGCAGCCAGGATTCTTGGTGGCTACGTTTGGCCTCCAAGATCTTACTCTTGTACTTTCTGCAAAAGAGAGTTCAGGTCTGCTCAAGCTCTTGGAGGTCACATGAATGTTCACAGGAGAGATAGAGCCAGGCTCAAGCAGACTCATGCAACTTGTCTTCCTCTTCATGATTGTAATAATAATAAGAGATCTTCTGATTCTGAAGAAGTAATCGTCGCTAATAATAGTGGAAGGCAACAAGAAGAAGATGATTTTGCGGGCTTCATCAGCCATCATCATAATAATAATAATCATTATTATGTTGAAACAGACTTGTCCATGGGATTATTACCTGCATCATCATCATCATCTCCTGATGAAGAAGCTTTAAGTTGTAAGAGACCTAAGATTTCTTCCAATAATATTTCTTCTTTATCAGTACAGCTTCCTGTCTTCATCAAGCCTTTCTCAAGCGATCACGCAGAAATGGAGATTGGAGTTCATAATAAGCCTAAAATAGAAGACTTGGATCTTGAACTCAGGCTGGGGATATCACAGAAAGTTAAGTGA 684 0.4035 MEGSHHSHPQHHHHYLMWLKRKQMFKSHIEAAAKSSSLEERAFAEDAARILGGYVWPPRSYSCTFCKREFRSAQALGGHMNVHRRDRARLKQTHATCLPLHDCNNNKRSSDSEEVIVANNSGRQQEEDDFAGFISHHHNNNNHYYVETDLSMGLLPASSSSSPDEEALSCKRPKISSNNISSLSVQLPVFIKPFSSDHAEMEIGVHNKPKIEDLDLELRLGISQKVK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1480 227 PANTHER OS07G0101800 PROTEIN 33 223 - -
Acco05g1480 227 SUPERFAMILY beta-beta-alpha zinc fingers 58 88 IPR036236 -
Acco05g1480 227 Gene3D Classic Zinc Finger 58 127 - -
Acco05g1480 227 Pfam C2H2-type zinc finger 61 85 - -
Acco05g1480 227 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Acco05g1480 227 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Acco05g1480 227 SMART c2h2final6 61 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1480 Acco-ChrAcco05 30702191 30702874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1480 39 221 C2H2 Transcription Factor Family AT5G06070 39.320 9.11e-27 101