Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1475 ATGGCGAATCGGTGGTGGGCAGGTAACGTCGCAGTGAGACCAAAAGATCCCTTGTCTTCGTCTCCATCACTTCATCTAAGAAAACCAGAGGATGACCATGGCGTGTTGAACCGGTTCGGTACAGTTCGAATGCAAGATTTTCTAGAAAGCGCCAATAACAACACGACTCCGAGCAATAGCAGCAATAGCAACACTAACCCCAACACAAATAACACCTCCCAGAGCCAGAACGCCGACGACGGTGACAGCCGAGATAACGGCCGGGAAGCTGATGATCAGAACATGGGTGGTAGCCATGACGGCACCGAACCGGGCAGCAAAGAACGGCGTCCCCGAGGCCGCCCTCCTGGGTCGAGGAACAAGCCGAAGCCACCAGTTGTTATGACAAAGGAGAGTCCCAACGCCCTCCGGAGTCACGTGCTGGAGATCTCCAGCGGCAATGATGTCGCCGAGAGCCTTTCTACCTTCGCCAACCGGAGGCACCGCGGGGTGTCGGTGCTCAGCGGAAGCGGCATTGTAACTAATGTCTCTCTCCGGCAACCGGCGGCACCAGGTGGGGTTGTCACACTAAACGGAAGGTTCGAGATTCTGTCACTATCCGGGGCATTCTTGCCGGCCCCCTCGCCTCCTGGGGCCACTGGGCTAACCGTGTACCTAGCGGGCGGGCAAGGGCAAGTTGTTGGCGGCGCCGTGGTGGGTCCACTGGTAGCATCAGGGCCAGTACTGGTGATTGCAGCCACATTCGCTAATGCGACTTATGAGAGGCTACCACTTGAGGATGAGCCATCTGGGGAAGAAGTTGAAACAATGACACCAAAACACGCAGGAGTGAATAATAATAATAATAATTCAGCAACTTCAGCTGTGCCTAATCCTTCAACATCTCAAGCTTTGAACGAACAAGTTTCGATGCCTGTGTTCAATAATTTGCCTCCAAATTTGGTGCCAAACAGTGATCATCAACAAATGCAACATGACGTGTTCTGGGGTACCCCTTCTCGCCATCCTCCTTTCTGA 1017 0.5388 MANRWWAGNVAVRPKDPLSSSPSLHLRKPEDDHGVLNRFGTVRMQDFLESANNNTTPSNSSNSNTNPNTNNTSQSQNADDGDSRDNGREADDQNMGGSHDGTEPGSKERRPRGRPPGSRNKPKPPVVMTKESPNALRSHVLEISSGNDVAESLSTFANRRHRGVSVLSGSGIVTNVSLRQPAAPGGVVTLNGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGAVVGPLVASGPVLVIAATFANATYERLPLEDEPSGEEVETMTPKHAGVNNNNNNSATSAVPNPSTSQALNEQVSMPVFNNLPPNLVPNSDHQQMQHDVFWGTPSRHPPF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1475 338 MobiDBLite consensus disorder prediction 46 80 - -
Acco05g1475 338 MobiDBLite consensus disorder prediction 273 296 - -
Acco05g1475 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 260 - -
Acco05g1475 338 ProSiteProfiles PPC domain profile profile. 133 271 IPR005175 -
Acco05g1475 338 CDD DUF296 137 219 IPR005175 -
Acco05g1475 338 Gene3D - 136 267 - -
Acco05g1475 338 MobiDBLite consensus disorder prediction 259 296 - -
Acco05g1475 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 249 IPR005175 -
Acco05g1475 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 65 330 IPR014476 GO:0003680
Acco05g1475 338 MobiDBLite consensus disorder prediction 1 134 - -
Acco05g1475 338 PIRSF ESCAROLA 46 338 IPR014476 GO:0003680
Acco05g1475 338 FunFam AT-hook motif nuclear-localized protein 136 263 - -
Acco05g1475 338 MobiDBLite consensus disorder prediction 81 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1475 Acco-ChrAcco05 30624592 30625608 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1475 1 337 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 51.603 2.23e-74 230