Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1473 ATGGCAAACCGGTGGTGGGATGGGGACGTGGCAATGAGATCGAAAGATCCCTTATTCTCTTCTCCATCACTTAAGCTGAGAAACCCAGAAGATGACCATGGCGGACCGAGCCGACTCGGTCCAAGACGCGAGCAAGACTTTCTTCTGGAAAACACCAATAACAACAACACCACCACTACTCCAACCAATAGCAGCAATAGCAACACTAACGCCAACACAAACACCACCTCCCAGTGCCAAAACGTCGCCGACGATGACGAGAGCCGACACAACGATGATCAAAACCCAGGTACCCATGACGCCACCACTGCTGAGCCAGGAAGCAGCAGCGGCCGACGTCCCCGAGGCCGCCCGGCCGGGTCGAAGAACAAGCCCAAGGCACCGGTGGTACTAACAAAGGAGAGCCCCAATGCCCTCCGGAGCCACGTGTTGGAAATCTCAACCGGCAGCGATGTTAGTGAGAGCCTCTCCACCTTCGCGAACCGGCGCCATCGTGGCGTGTCGGTGCTCAGCGGAAGCGGCATTGTAACCAATGTCACACTCCGGCATCCGTCAGCTCCCGGTGGGGTTATCACACTAAATGGAAGGTTCGAGATTCTGTCACTATCTGGGGCATTTTTGCCAGCCCCTTCGCCACCCGGGGCCACTGGGCTAACCGTGTACCTCTCTGGCGGACAAGGGCAGATTGTTGGTGGGAATGTGGTGGGTTCACTGATAGCATCAGGGCCAGTACTAGTGATTGCAGCCACATTCGCTAATGCAACTTATGAGAGGTTGCCACTTGAGGAAAATGAGCCATCTGGGGAAGAAGTAGAAGTGCAGCAAGCACAACAGCAACAACAACCAGGAACTGCTGGGCCTTCAGCTTCAGCTTCCCAAAGTTTGAATGAACAAGTTTCAATGCCAATGTTCAATAACATGCCCCCAAACTTGATGCCAAGTAATGATCACATGCCTCATGATTTATTCTGGGCGCCGCCTGCTCGCCAACCTCCGCCTTACTGA 1005 0.5433 MANRWWDGDVAMRSKDPLFSSPSLKLRNPEDDHGGPSRLGPRREQDFLLENTNNNNTTTTPTNSSNSNTNANTNTTSQCQNVADDDESRHNDDQNPGTHDATTAEPGSSSGRRPRGRPAGSKNKPKAPVVLTKESPNALRSHVLEISTGSDVSESLSTFANRRHRGVSVLSGSGIVTNVTLRHPSAPGGVITLNGRFEILSLSGAFLPAPSPPGATGLTVYLSGGQGQIVGGNVVGSLIASGPVLVIAATFANATYERLPLEENEPSGEEVEVQQAQQQQQPGTAGPSASASQSLNEQVSMPMFNNMPPNLMPSNDHMPHDLFWAPPARQPPPY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1473 334 MobiDBLite consensus disorder prediction 263 334 - -
Acco05g1473 334 CDD DUF296 140 251 IPR005175 -
Acco05g1473 334 MobiDBLite consensus disorder prediction 47 82 - -
Acco05g1473 334 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 264 - -
Acco05g1473 334 MobiDBLite consensus disorder prediction 1 130 - -
Acco05g1473 334 ProSiteProfiles PPC domain profile profile. 136 275 IPR005175 -
Acco05g1473 334 MobiDBLite consensus disorder prediction 26 45 - -
Acco05g1473 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 68 325 IPR014476 GO:0003680
Acco05g1473 334 MobiDBLite consensus disorder prediction 270 312 - -
Acco05g1473 334 FunFam AT-hook motif nuclear-localized protein 139 266 - -
Acco05g1473 334 Pfam Plants and Prokaryotes Conserved (PCC) domain 140 252 IPR005175 -
Acco05g1473 334 PIRSF ESCAROLA 51 334 IPR014476 GO:0003680
Acco05g1473 334 Gene3D - 139 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1473 Acco-ChrAcco05 30591522 30592526 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1473 1 334 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 50.146 3.12e-74 229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1473 05 30591522 30592526 Acco05g1473 05 30591522 30592526 CCT
Acco05g1473 05 30591522 30592526 Acco05g1473 05 30591522 30592526 ECH