Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1463 ATGGTTAGGACAACGACAGGGCTTGGCTCGTCATGTGGAGCATGCAAGTTCCTGCGGAGGAAGTGTACTTCTGATTGCATATTTGCTCCTTACTTCTCCTATGACCAGGCTGCTACCCATTTCGCAGCAGTGCACAAGGTTTTTGGAGCAAGTAACGCCTCTAGGCTACTGCTACACCTACCAGTGCAGAGTAGAAGCGATGCAGCCATCACTGTGTCTTACGAGGCACTCGCTCGGATGCATGATCCAATATATGGTTGTGTTGCTCAAATCTTTGCCCTGCAGCAACAGGTTGCAAGCTTGCAAGAGGAAATAGATAAACTTGGTAATATGATGGCCAACTCTCCTGTTTGCGCTGCCATTTCTGGTGGCAGTTCTCAGGCCTGGACAAGCAGAAACACGGACAGGATAGATTTTTCTTGGCAGCAAGATGCAACGACTACGCAACTTTATCAGACTCAACTATCTACTCTGCTTTCTCACCAAGCAAGTGCTGCTGCAGCATACCAGTGCTTGGAAGGACAGGTGAATTGGGATTTTCCAGATGCTCTTCAATTTGGTGACCATGTATTTGATGAGTCTGAGCCTACTTCATTAGAGAAGCTCCTATCAGGAATTGACCAACAGGTTTTCATCAATTATCCTTGGTCCTAA 654 0.4694 MVRTTTGLGSSCGACKFLRRKCTSDCIFAPYFSYDQAATHFAAVHKVFGASNASRLLLHLPVQSRSDAAITVSYEALARMHDPIYGCVAQIFALQQQVASLQEEIDKLGNMMANSPVCAAISGGSSQAWTSRNTDRIDFSWQQDATTTQLYQTQLSTLLSHQASAAAAYQCLEGQVNWDFPDALQFGDHVFDESEPTSLEKLLSGIDQQVFINYPWS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1463 217 PANTHER LOB DOMAIN CONTAINING PROTEIN 7 156 - -
Acco05g1463 217 Coils Coil 91 111 - -
Acco05g1463 217 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Acco05g1463 217 ProSiteProfiles LOB domain profile. 10 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1463 Acco-ChrAcco05 30514571 30515297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1463 9 114 AS2 family AT5G06080 73.585 1.80e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco05g1463 LOB 1.9e-34 No_clan