Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1447 ATGCCTTTCATCTCGCAATTTCAACGTCAGTCTGATTACAATCTCTTCAGTCCCACAACTCCGATCGTCATTGACAATGGCGCATTTTATTTTCGTATCGGATGGGCAGGAGAGACTGAACCTCGTGTTGTTTTCCGCAACATTGTGCAAAGGCCACGCCATAAAGTCACCGGTGAAACTGTCACTATTGTTGGTGATCACAATCCAGCATTAATGAAATACTTTGACTGCACTCGCTCTGGACCACGCTCAGCATTTGATAGCAATGTTGTGTATCAGTTTGAAATAATGGAATACATTCTTGACTTTGCCTTTGACCGGATGGGTGCAAATGGATCAGAGATTGATCATCCTGTCCTGATCACAGAATGTGTGTGTAATCCAGTTCAATCTCGTGGTAAAATGGCAGAACTTCTTTTTGAGACTTATGGTGTTCCATCAATAGCATTTGGGGTTGATGCAGCTTTTAGCTACAAGTATAATCAACACCATGGAGTTTGCAAAAAAGATGGTCTTGCTATGTGTCCTGGATTTACCACAACCCATGTAATTCCGTTTGTAGATGGGGAACCTGTTTATAAAGGATGCTGCCGTACAAATATTGGTGGCTTTCATGTAACTGATCATTTAAAGCAACTTCTTTCACTTAAATATCCCTACCATGTGGCTAGGTTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACAGGATTATGCGTCTGAAGCTCAGCTGTTTCGGAGAGGAGGGAAGGAAGCTGAAGAGAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCGCCACCAACTGAGGAACCTCCTTCTGAGGAAGAGATTGCAAGAAAGGCAGCAATTAGAGAGAAACAAGGTCAAAGGTTGCGAGAAATGGCTGAGGCAAAGAGATCATCCAGAATAAATGAACTGGAAAATGAATTGCATGGCTTGGAGTTTCTCTTACAACAGCTTGAACAAGTAGACGAGAGTGACATTCCATCTTTCCTATCAGACACTGGCTATGTCTCTAAGCAGGAGATAGAATCTGCCCGTGCCAAAATCACACAATCTTTACGGAAAGCAAAAGGTGAACCAAAGAGTGATCTAGCTGAAACTGAAAAGGCTGATTCTGCTAATAGTGAGAAGTATTCTCTTATAAACATCCCCGATGAAACACTAACACCTGAACAGCTTGTTGAAAAGAAGAAGCAGCTGTCACTCAAGTCCATGTCAGAAGGGCGGCAGCGATCAAGACAGAAACGGTATGAGGAGGAAATGCAACGAGAGAGGAGGTTACAGCTAGAGGAGGAGAAACGCCTAGAGAACCCAGAGCTTTTCCTGGAGCAATTGCATGCCAAATACAAAGATCTATCAGAAAAAGTTGACCAACGAAAAAGACTCAAGACAAATGGAAACCACACAAATGGAAACAATTTGTCTGGTGGTGTTGGTCGTGGCGAGAGGCTAAATGCTGCTCAAAGGGAAAGAATGCGCCTGTTGACAACAGCAGCCTTCGATCGCGGTAAAGGTGAGGATACATTTGGCGCCAGAGATGAGGATTGGCACCTCTACAAATTGATGAGTAGGGATAATGATGATGATGACGAGGGTCCCGACGAGGATGAGGCAGAACTGGCCCGCATCTCTTCTAGGCTCCAGGATTTGGATCCTACATTTGTACCCAAGTTAGAAACTGGTAATGCACAATCTGCTGAGGCAGTGCCACGTTCTCGACCTCTCACGAAAGAGGATTTCCAGATCATTTTTGGGGTCGAAAGATTCAGATGCCCCGAGATTCTGTTCAATCCAAACTGGATCGGGGTTGATCAGGTAGGGTTAGACGAGATGGCCGGGGTGTCGATAAGGCGGTTGCTGGACAAGGATGAAGGTTTGGAAGAGAGACTAACTGATTCCATACTTGTGACTGGTGGGAGTTCTGTGTTTCCTGGTATGATCGAACGCCTTGAAGCTGCGATTAGGATGATCAGACCCTGCGGATCACCCATAAGAATAGTGAGAGCATTGGATCCAGTTCTGGATGCATGGAGAGGTGCTTCTGCTTATGCCTCAGCTCCTCTGTTTCATACACAAACTTTCAGTAGGGCGGATTATTATGAGAAGGGTGAAGATTGGCTTCGTGGTTATCAACTCCAATATACATTATAG 2172 0.4475 MPFISQFQRQSDYNLFSPTTPIVIDNGAFYFRIGWAGETEPRVVFRNIVQRPRHKVTGETVTIVGDHNPALMKYFDCTRSGPRSAFDSNVVYQFEIMEYILDFAFDRMGANGSEIDHPVLITECVCNPVQSRGKMAELLFETYGVPSIAFGVDAAFSYKYNQHHGVCKKDGLAMCPGFTTTHVIPFVDGEPVYKGCCRTNIGGFHVTDHLKQLLSLKYPYHVARFTWEKVEDLKMEHCYIAQDYASEAQLFRRGGKEAEEKTRCWQLPWVPPPTEEPPSEEEIARKAAIREKQGQRLREMAEAKRSSRINELENELHGLEFLLQQLEQVDESDIPSFLSDTGYVSKQEIESARAKITQSLRKAKGEPKSDLAETEKADSANSEKYSLINIPDETLTPEQLVEKKKQLSLKSMSEGRQRSRQKRYEEEMQRERRLQLEEEKRLENPELFLEQLHAKYKDLSEKVDQRKRLKTNGNHTNGNNLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGARDEDWHLYKLMSRDNDDDDEGPDEDEAELARISSRLQDLDPTFVPKLETGNAQSAEAVPRSRPLTKEDFQIIFGVERFRCPEILFNPNWIGVDQVGLDEMAGVSIRRLLDKDEGLEERLTDSILVTGGSSVFPGMIERLEAAIRMIRPCGSPIRIVRALDPVLDAWRGASAYASAPLFHTQTFSRADYYEKGEDWLRGYQLQYTL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1447 723 FunFam ARP5 actin-related protein 5 homolog 613 682 - -
Acco05g1447 723 SMART actin_3 19 719 IPR004000 -
Acco05g1447 723 MobiDBLite consensus disorder prediction 359 380 - -
Acco05g1447 723 FunFam Actin-related protein 5 171 202 - -
Acco05g1447 723 Pfam Actin 19 268 IPR004000 -
Acco05g1447 723 Pfam Actin 588 714 IPR004000 -
Acco05g1447 723 Gene3D Actin; Chain A, domain 4 203 253 - -
Acco05g1447 723 Coils Coil 346 366 - -
Acco05g1447 723 Gene3D - 176 202 - -
Acco05g1447 723 Coils Coil 449 469 - -
Acco05g1447 723 MobiDBLite consensus disorder prediction 404 427 - -
Acco05g1447 723 PANTHER ACTIN 21 711 IPR004000 -
Acco05g1447 723 FunFam Putative actin-related protein 5 683 711 - -
Acco05g1447 723 Gene3D Actin; Chain A, domain 4 518 612 - -
Acco05g1447 723 MobiDBLite consensus disorder prediction 359 391 - -
Acco05g1447 723 Gene3D - 19 430 - -
Acco05g1447 723 SUPERFAMILY Actin-like ATPase domain 170 715 IPR043129 -
Acco05g1447 723 Coils Coil 421 441 - -
Acco05g1447 723 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Acco05g1447 723 Coils Coil 309 329 - -
Acco05g1447 723 Gene3D - 683 711 - -
Acco05g1447 723 Gene3D - 613 682 - -
Acco05g1447 723 FunFam Actin-related protein 5 18 170 - -
Acco05g1447 723 FunFam Actin-related protein 5 203 257 - -
Acco05g1447 723 SUPERFAMILY Actin-like ATPase domain 19 159 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1447 Acco-ChrAcco05 30218693 30224135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1447 564 710 Cytoskeleton Gene Families AT3G46520 32.432 3.71e-15 76.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1447 05 30218693 30224135 Acco05g1447 05 30218693 30224135 CCT
Acco05g1447 05 30218693 30224135 Acco05g1447 05 30218693 30224135 ECH