Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1437 ATGGGTGGCTGCTACAGCACAGGGATCAGATCTGAAAACAGCTCACGCAAGGGTAACACTTCTGTTCTTCCCTGCTTTCCTCCACTAATTTTTGCTTCATCAGCTTGTTTGGTGCTTTCTGAGATCGATTTGGCTTCGTGTGCAGCTGTGAATTTGACCCATTATAGCAAAGAAGAGGATGGTTCGATTGGTGGAAACAATAAGGTCTCCCAATTGAAAATTTTCACATATAATGAGCTAAAAGCAGCTACAAGGAACTTTCATCCAGGCTATAAAGTGGCTGAAGGTTGGTTTGGTGATGTCTTTAAGGGGTGGCTTGATGAGCAGACGCTTGCACCTGCTAAACCAGGCACTCGGATTGCCATTGCTGTGAAGAAACTTAAAAAAGATGGCTTCCAAGGGGACAACGAGTGGTTGGTGAGACAGATCAATTTTCCGGGACAGCTGCATCATCCTAACCTTGTGAAATTGATTGGCTACTGCTTAGACGATCAGCACCGACTTTTGGTACATGAGTTTTTGACCAAAGGCAGCTTGGATAATTATTTATTTCAAAGGACATGTCATGATGAACCACTTTCTTGGAGCAACCGTATGAAAATTGCCCTTGATGTTGCGAAGGCTCTTGCATTTCTTCATATTGACCAAGTAAATGTGATATATCAAGATTTAAAAGCCTCTCGTATCTTGCTTGATTCAAACTTCAATGCAAAGCTATCTTATTTTGTTTTGGCAAACGACAGGCCAATTGGTGTGAGACATGCTGAATATATGGCTCCTGAGTATCCATTGACAGGTGCTTGTGTTCTGTTTCTAGTAGCTGCATTTGGAGGTTGCATTGGTTCTGTGTTGAATTGTTACGTTTTGAGAACCAATTTTCTACGTTCTAGGCTGCTGCATCCTAGACAGGTAGCTCAAAGCAGCAGCAGTGTTCCTAATTCAACATCATAA 951 0.4227 MGGCYSTGIRSENSSRKGNTSVLPCFPPLIFASSACLVLSEIDLASCAAVNLTHYSKEEDGSIGGNNKVSQLKIFTYNELKAATRNFHPGYKVAEGWFGDVFKGWLDEQTLAPAKPGTRIAIAVKKLKKDGFQGDNEWLVRQINFPGQLHHPNLVKLIGYCLDDQHRLLVHEFLTKGSLDNYLFQRTCHDEPLSWSNRMKIALDVAKALAFLHIDQVNVIYQDLKASRILLDSNFNAKLSYFVLANDRPIGVRHAEYMAPEYPLTGACVLFLVAAFGGCIGSVLNCYVLRTNFLRSRLLHPRQVAQSSSSVPNSTS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1437 316 PANTHER OS01G0588500 PROTEIN-RELATED 69 268 - -
Acco05g1437 316 Gene3D Phosphorylase Kinase; domain 1 57 173 - -
Acco05g1437 316 Pfam Protein tyrosine and serine/threonine kinase 92 247 IPR001245 GO:0004672|GO:0006468
Acco05g1437 316 ProSiteProfiles Protein kinase domain profile. 87 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1437 316 SUPERFAMILY Protein kinase-like (PK-like) 68 266 IPR011009 -
Acco05g1437 316 FunFam Serine/threonine-protein kinase BIK1 54 173 - -
Acco05g1437 316 Gene3D Transferase(Phosphotransferase) domain 1 174 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1437 Acco-ChrAcco05 30088190 30091096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1437 50 266 Glycoside Hydrolase AT3G07070 41.667 2.05e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco05g1437 PK_Tyr_Ser-Thr 1.3e-25 CL0016