Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1436 ATGGATTCCTGCTATAGTACGAGGATCAAATTTGAAAACCCTTCACGCAAGGCTGTGGATATAACCCATGATAAAAAAGAAGAGGATGGTTCCTTTGGCGGCAGCAAAGAAGTCTCCCAATTGAAAATTTTCACATATAATGTGCTAAAAACAGCTACAAGGAACTTTAATAGCGACCGTGTGGTGGGCGAAGATGGGTTTGGTGTTGTATTTAGGGGTTGGTTTGATGAGCAGACACTTGCACCTGCTATACCTGGCACTGGGATAGTCATTGCTGTCAAGAAGCTTAACCAAGAAGGCTTCCAGGGACACAACGAGTGGTTGACAGAGATAAATTTTCAGGGGCAGCTGCATCATCCTAACCTTGTAAAATTGATCGGCCATTGCTTAGAGGATGAGCAGCGGTTTTTGGTATATGAGTTTTTGACCAAAGGCAGCTTGGATAATCATTTATTTCGAACTTCTAATATCTTGCTTGATTCGAACTTCAATGCAAAGCTATCTAATTTCGGGTTGGCAAAGGACGAACCATATAGGAGCCATGCCTCTACAAGGGTCATGGCCACTTATGGCTATCCTGCTCCTGAGTATATGGCCACAGGTCACCTGACCAAGAAGAGTGATGTCTACACGTTCGGGGTTTTTCTGCTTGAAATTATGTCAGGCAAACGTGCATTGGACAGAAACAGGCCAGGCAGGGAACATAATTTAGTGGAATGGGCCAAGCCATACCTTTCGAGTAAACGCCGGATTTTCCAAGTTATGGATGCTCGTATTGAAGGCCAGTACATACATGGTACGTGA 804 0.4415 MDSCYSTRIKFENPSRKAVDITHDKKEEDGSFGGSKEVSQLKIFTYNVLKTATRNFNSDRVVGEDGFGVVFRGWFDEQTLAPAIPGTGIVIAVKKLNQEGFQGHNEWLTEINFQGQLHHPNLVKLIGHCLEDEQRFLVYEFLTKGSLDNHLFRTSNILLDSNFNAKLSNFGLAKDEPYRSHASTRVMATYGYPAPEYMATGHLTKKSDVYTFGVFLLEIMSGKRALDRNRPGREHNLVEWAKPYLSSKRRIFQVMDARIEGQYIHGT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1436 267 Gene3D Phosphorylase Kinase; domain 1 32 141 - -
Acco05g1436 267 Pfam Protein tyrosine and serine/threonine kinase 154 226 IPR001245 GO:0004672|GO:0006468
Acco05g1436 267 Pfam Protein tyrosine and serine/threonine kinase 59 153 IPR001245 GO:0004672|GO:0006468
Acco05g1436 267 ProSiteProfiles Protein kinase domain profile. 56 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1436 267 PANTHER OS01G0588500 PROTEIN-RELATED 152 263 - -
Acco05g1436 267 FunFam Serine/threonine-protein kinase BIK1 23 141 - -
Acco05g1436 267 SUPERFAMILY Protein kinase-like (PK-like) 38 244 IPR011009 -
Acco05g1436 267 Gene3D Transferase(Phosphotransferase) domain 1 151 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1436 Acco-ChrAcco05 30081202 30083710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1436 12 263 Glycoside Hydrolase AT3G07070 38.926 3.50e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco05g1436 PK_Tyr_Ser-Thr 2.9e-12 CL0016