Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1429 ATGAGAAAGCCTTGCTGTGACAAAGAAGACACCAACAAAGGAGCTTGGTCTAAACAAGAAGACCAGAAGCTCATCAATTACATTCAAACTCATGGTGAAGGTTACTGGCGTTCCCTTCCCAAAGCTGCAGGGCTGCATCGTTGTGGAAAGAGTTGCAGGTTGAGATGGATAAATTATCTGAAGCCAGATATCAAACTTGGAAACTTTGCCCAAGACGAAGAAGACCTCATCATCAAGCTCCATGCCCTCCTCGGCAACCGGTGGTCGCTGATAGCTGGAAGGTTGCCCGGAAGAACAGATAATGAGATAAAGAATTATTGGAATTCTCACATCCGCAGAAAGCTAATGAAGATGGGAATAGACCCTGAGAACCATAAGCTCATTCATCTTCATCGTCTTTCTTCTTCTGCTGCTGCTGCAACTTCCATGGAGAAAAAACCTAATTCCAACAACTTGAATCTTGACCTTACTATTGCTTTTGATCCTTCTCTCACACCAAACCCAAACTCTGCTGAGTCCTCTCACAAAAATAATAATATTACTACTATGGAAATGGATCATCATCAGAGGCAATCAGCTCCAACTCTTCCTCTATTTAACTAG 603 0.4279 MRKPCCDKEDTNKGAWSKQEDQKLINYIQTHGEGYWRSLPKAAGLHRCGKSCRLRWINYLKPDIKLGNFAQDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEIKNYWNSHIRRKLMKMGIDPENHKLIHLHRLSSSAAAATSMEKKPNSNNLNLDLTIAFDPSLTPNPNSAESSHKNNNITTMEMDHHQRQSAPTLPLFN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1429 200 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Acco05g1429 200 CDD SANT 68 111 IPR001005 -
Acco05g1429 200 Gene3D - 13 65 - -
Acco05g1429 200 FunFam MYB-related transcription factor 12 65 - -
Acco05g1429 200 FunFam MYB transcription factor 67 143 - -
Acco05g1429 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Acco05g1429 200 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Acco05g1429 200 CDD SANT 15 60 IPR001005 -
Acco05g1429 200 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 176 - -
Acco05g1429 200 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Acco05g1429 200 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Acco05g1429 200 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Acco05g1429 200 SMART sant 65 113 IPR001005 -
Acco05g1429 200 SMART sant 12 62 IPR001005 -
Acco05g1429 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Acco05g1429 200 Gene3D - 68 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1429 Acco-ChrAcco05 30018905 30020415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1429 2 159 MYB Transcription Factor Family AT4G38620 64.557 6.46e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g1429 Myb_DNA-binding 3.6e-13 CL0123