Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1426 ATGGACATTTCTTCCTCCTCCTCCTCATCCTCATCCTCCTCCTCCGGCCCTCTCAGTCCCGACGCCAGTCTCGATGCCGACACCCCCCGAAGCCCCCTCGCCGTCCGGCGAGCCCTCCAGCTCCTCCAATCTGATGACCCCGATTTCAAGCTCCAAGCCGCTCGTGATATTCGCCGCCTCACTAAAACCTCCCAGCGTTGTCGCCGCCAGCTCTCTCAAGCTGTCGGTCCCCTCGTTTCCATGCTCCGATTCGACTCGTCCGAGTCCCATGAACCTGCTCTTCTAGCTTTGCTCAACCTTGCTGTCAAAGACGAAAAGAACAAAATCAGCATTGTGGAAGCTGGTGCTTTAGAACCGATAATTTCCTTCCTGAAGTCACAGAATATAAACCTGCAAGAGTGCGCCACTGCATCTTTGCTCACTTTATCCGCCTCTGCAACCAACAAGCCAATCATTTGTGCTTCTGGAGCCATTCCTCTTCTTGTGGAGATCCTCAGAGATGGAAGCCCACAAGCTAAGGCTGATGCAGTAATGGCTCTTTCCAATTTATCCACCCACCTGGACAATCTCAGCGCCATTCTCAAAACAAACCCAATGCCTTTCATAGTTGATCTTCTCAAAACCTGTAAAAAATCCTCAAAAACAGCTGAGAAGTGCTGCGCTTTGATAGAATCCTTGGTGGGTTTTGATGAGGGCAGGACCGCCTTGACATCCGAGGAAGGTGCAGTCCTTGCAGTTGTGGAAGTCCTTGAAAATGGCAATCTCCAAAGCCGGGAGCATGCGGTTGGAGCGCTGTTGACAATGTGTGAAAGCGACCGATGTAAATACAGGGAACCGATTCTCCAAGAAGGCGTAATCCCAGGACTTCTGGAGCTTACCGTTCAGGGAACACCCAAGTCGCAGTTAAAAGCCCGCAATCTCTTGCAACTACTGAGAGAAACTCCTTATCCCAGATCAGAAATTCAACCTGACACACTTGAGAACATAGTTTGCAATATCATATCCCAGATTGATGGGGATGAGCAGCCTGGTAAAGCAAAGAAGATGCTAGCTGAGATGGTCCAAGTCAGCATGGAACAGAGTCTGAGACATTTACAGCAAAGGGCTCTTGTGTTCACCCCAACAAGTGATCGGCCTATTACTAATTGTGCTTCTGAAGTATCTTCAAAATGA 1173 0.497 MDISSSSSSSSSSSSGPLSPDASLDADTPRSPLAVRRALQLLQSDDPDFKLQAARDIRRLTKTSQRCRRQLSQAVGPLVSMLRFDSSESHEPALLALLNLAVKDEKNKISIVEAGALEPIISFLKSQNINLQECATASLLTLSASATNKPIICASGAIPLLVEILRDGSPQAKADAVMALSNLSTHLDNLSAILKTNPMPFIVDLLKTCKKSSKTAEKCCALIESLVGFDEGRTALTSEEGAVLAVVEVLENGNLQSREHAVGALLTMCESDRCKYREPILQEGVIPGLLELTVQGTPKSQLKARNLLQLLRETPYPRSEIQPDTLENIVCNIISQIDGDEQPGKAKKMLAEMVQVSMEQSLRHLQQRALVFTPTSDRPITNCASEVSSK 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1426 390 MobiDBLite consensus disorder prediction 1 21 - -
Acco05g1426 390 PANTHER U BOX DOMAIN-CONTAINING 25 318 - -
Acco05g1426 390 FunFam U-box domain-containing protein 4 21 371 - -
Acco05g1426 390 SUPERFAMILY ARM repeat 35 339 IPR016024 -
Acco05g1426 390 SMART arm_5 145 185 IPR000225 GO:0005515
Acco05g1426 390 SMART arm_5 186 228 IPR000225 GO:0005515
Acco05g1426 390 SMART arm_5 63 102 IPR000225 GO:0005515
Acco05g1426 390 SMART arm_5 229 270 IPR000225 GO:0005515
Acco05g1426 390 SMART arm_5 104 144 IPR000225 GO:0005515
Acco05g1426 390 Pfam Armadillo/beta-catenin-like repeat 148 184 IPR000225 GO:0005515
Acco05g1426 390 Pfam Armadillo/beta-catenin-like repeat 105 139 IPR000225 GO:0005515
Acco05g1426 390 Gene3D - 21 371 IPR011989 -
Acco05g1426 390 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 156 198 IPR000225 GO:0005515
Acco05g1426 390 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 115 157 IPR000225 GO:0005515
Acco05g1426 390 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1426 Acco-ChrAcco05 29978811 29981916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1426 35 312 U-box Gene Family AT2G23140 35.000 1.28e-40 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1426 05 29978811 29981916 Acco05g1426 05 29978811 29981916 CCT
Acco05g1426 05 29978811 29981916 Acco05g1426 05 29978811 29981916 ECH