Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1423 ATGGGGTTTTCCCAAGAAACTTTCACTGATTCTTGGGAGCCTTCAAATCCAAAAAATGCTCCTGATAATACAGCTGCAGATCACTACTACGACTATAACAAGCTCAAATTCAGAAGTACTTGGAGAAAAATGATCTGGATGATTGGGTTTACCTGTTATACCCCTTGTCGCCGCCGCCGGCGAAACAACACCGGTGGGATGATTCAGGGCCAAGACAAAAACAAGGCGTGGCTACTGGCGGAGTCCGGTGGGTGTCCAGCGGAGTCCACAAATGCGGACCCACTATCCGTTCACTCATCTTTCAGATTCAACATATGTTCTCAGGTCGAACTAGAATCTCTGGAAATGAGTTCTTCCGCCGCGGCGACGGTCTTGATGGTGAATTTGGATAATGGGGTGAGTAAATCTCCAGCTCGGGAGCTAAAATGGTGGTGGAAAATAGATTCACTGAATAAAACCATATATCCAGGGACCAATAATACTCTCATCAGATTCAACTACAGTGAAATCCTCTCTGCTACCCACAATTTCTCAGAAGGTAGAGTATTGGGAAGAGGGGCTTTGAGCTGTGTATTCAGGGGCAAAATTGGAATTCTGAGAAGTGCTGTGGCAATTAAGAGATTGGATACAGAAGACAAAGAGTGTGCCAAGTCTTTCTGTAGAGAATTGATGATTGCCAGCTCTCTTCACAACCCAAACGTTGTTCCTCTTGTAGGGTTTTGTGCTGATCCAGAGGAGGGTTTGTTTCTGGTCTATAAATTTGTCTCAGGAGGCAGCTTAGAACGCCACTTGCATGGGAAGAAGATGAAGGGTGTGAAGGGAAATTCTCCACTACCTTGGTCCGTGAGGTATAAAGTTGCAGTTGGAATTGCAGAAGTAATCTCTTATCTGCATAATGGAACCAAAAGATGTGTTGTTCACAGAGACATTAAGCCCTCTAACATTCTTCTTTCCTCTAGAAAATCTCCCAAGCTATGTGATTTTGGAATAGCTACATGGACTTCAGCACCTTCGGTCCATTTCCTTTGCAAAACTGTTAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTTCAACATGGGAAGGTGTCAGATAAGACTGATGTTTACGCTTTTGGAGTAGTGTTACTGGAACTCATAACTGGTCGGAAGCCGATTGAGGCAAAAAGGCCACCGGGAGAAGAGAATTTGGTCTCATGGGCTAAACCATTGCTTCAGAAAGGGAAAGGAGCCATTGAAGAGCTGCTTGATCCTCAACTCAGTTGCACCTTAAAATCCTCGAATCAGATGTGTCGAATGATTGAAGCTGCAACAGCCTGCATCACACACGAAGAATCGCGAAGACCCGGCATCAAAGAGATCGTCGCGATACTGAGAGGTGAAGAACCGATCTCCTCTAAAAGGAGGAAGCCTTCTTTAAGTGCTTATGGATCTGTAATGGATTCTTATCCTCAGTTACTAGATACAAACAAAGATTTCAAAGGTCACCTGGCTTTGGCTATGTTAGGTGTTTCAGAGTTTGAGGATGATGATTACCTCTTTGGTCGTTAA 1551 0.4417 MGFSQETFTDSWEPSNPKNAPDNTAADHYYDYNKLKFRSTWRKMIWMIGFTCYTPCRRRRRNNTGGMIQGQDKNKAWLLAESGGCPAESTNADPLSVHSSFRFNICSQVELESLEMSSSAAATVLMVNLDNGVSKSPARELKWWWKIDSLNKTIYPGTNNTLIRFNYSEILSATHNFSEGRVLGRGALSCVFRGKIGILRSAVAIKRLDTEDKECAKSFCRELMIASSLHNPNVVPLVGFCADPEEGLFLVYKFVSGGSLERHLHGKKMKGVKGNSPLPWSVRYKVAVGIAEVISYLHNGTKRCVVHRDIKPSNILLSSRKSPKLCDFGIATWTSAPSVHFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRPPGEENLVSWAKPLLQKGKGAIEELLDPQLSCTLKSSNQMCRMIEAATACITHEESRRPGIKEIVAILRGEEPISSKRRKPSLSAYGSVMDSYPQLLDTNKDFKGHLALAMLGVSEFEDDDYLFGR 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1423 516 MobiDBLite consensus disorder prediction 1 20 - -
Acco05g1423 516 ProSiteProfiles Protein kinase domain profile. 177 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1423 516 SUPERFAMILY Protein kinase-like (PK-like) 155 458 IPR011009 -
Acco05g1423 516 Gene3D Phosphorylase Kinase; domain 1 162 254 - -
Acco05g1423 516 Gene3D Transferase(Phosphotransferase) domain 1 255 473 - -
Acco05g1423 516 FunFam probable serine/threonine-protein kinase PBL7 136 254 - -
Acco05g1423 516 PANTHER OS08G0249100 PROTEIN 158 470 IPR046958 -
Acco05g1423 516 SMART serkin_6 177 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1423 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Acco05g1423 516 FunFam Putative receptor-like serine/threonine-protein kinase 255 473 - -
Acco05g1423 516 Pfam Protein kinase domain 178 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1423 Acco-ChrAcco05 29895756 29898511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1423 165 478 Trihelix Transcription Factor Family AT1G70460 41.250 5.86e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Acco05g1423 Pkinase 7.4e-42 CL0016