Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1416 ATGGAGAAGAACACAGGTGGTGGGTTGAGGAAAGGGACCTGGACCGAAGAGGAAGACTATCTTCTCAGAGCTTGCGTTCACAACTATGGAGAAGGAAAATGGCATCTTGTTCCTCAAAGAGCTGAGCTCTTCGTGAACATATATAGATGGTCATTGATAGCTGGAAGGCTACCAGGAAGAACAGCAAACGACGTGAAGAACTTCTGGCATACCACCATGCGCAATAGGAAGAAGAAAGAAGAAAGCCAGGAGACAAAAGCAAAAGAGGTGATGATGCATAATCATATAGAGAAGACGACGACAGAAGAAGTAAAACCGCAAGTAGTGATAAAACCACAGCCTCATACTTTCTCTAAGAATTCGCCGTGGCTGAGGAGAAATACTAATAATAATCACAATGAAAATAAGAAGATTGTTTCTACAAGTGAGGGTGACGCAGCAGCCAGAACTAGTTCAGGTGATTTCAAATAG 471 0.4289 MEKNTGGGLRKGTWTEEEDYLLRACVHNYGEGKWHLVPQRAELFVNIYRWSLIAGRLPGRTANDVKNFWHTTMRNRKKKEESQETKAKEVMMHNHIEKTTTEEVKPQVVIKPQPHTFSKNSPWLRRNTNNNHNENKKIVSTSEGDAAARTSSGDFK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1416 156 MobiDBLite consensus disorder prediction 113 156 - -
Acco05g1416 156 Pfam Myb-like DNA-binding domain 11 71 IPR001005 -
Acco05g1416 156 CDD SANT 13 71 IPR001005 -
Acco05g1416 156 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 49 134 - -
Acco05g1416 156 MobiDBLite consensus disorder prediction 113 137 - -
Acco05g1416 156 Gene3D - 8 79 - -
Acco05g1416 156 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 77 IPR017930 -
Acco05g1416 156 SMART sant 10 75 IPR001005 -
Acco05g1416 156 ProSiteProfiles Myb-like domain profile. 6 73 IPR001005 -
Acco05g1416 156 SUPERFAMILY Homeodomain-like 9 69 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1416 Acco-ChrAcco05 29824919 29826165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1416 8 121 MYB Transcription Factor Family AT1G66370 41.722 1.31e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco05g1416 Myb_DNA-binding 5.7e-13 CL0123