Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1415 ATGGAGAAGAACACAGGTGGTGGGCTGAGGAAAGGGACCTGGACCCAAGAGGAAGACGATCTTCTCAGAGCTCGCGTTCACAACTATGGAGAAGGAAAATGGCATCTTGTTCCTCAAAGAGCTGGCTTGAAGAGATGCAGGAAAAGCTGCAGAATGAGATGGTTGAATTATCTGAAACCCAACATCAACCGAACAAGCTTCAATGAAGACGAGGTTGATATGATTCGAAGATGGTCATTGATAGCTGGAAGGCTACCAGGAAGAACAGCGAACAACGTGAAGAACTTCTGGCACACCAACATGTGCAATAGGAAGGAGAAAGGAGAAAGCCAAGAGACAAAAGCAAAAGAGGTGGTAATGCATAACAATGTAGAGAAGACGACGACAGAAGAAGTAAAACCGCACGTAGTGATAAAACCTCAGCCTCATACTTTCTCTAAGAATTCGCCGTGGCTGAGGAGAAATAATAATAATAAGGTTGTTTGTGCAAGTGAGGATGATGCTGCAGCCAGAACTAGTGCAGGTGATTTCAAAGAGGGTATTGCAGAGCCAAGTGCTGCTGCGGATTTTACGCTGAGAGATCATCATCAGTCTGAAGAGTGGTGGGAGAGTCTAATGGACAAGGAAGTAGATGAAGGGCAGTTTGGGGATTTCGCCATGAAGCTTTGGGACTATGACTTTCTAAAAATGGAAGGTCAATTTGGGGAAGGCAAGAGCTGTTGGGGTCACTGTTCACGTAAGTTCTAA 747 0.4525 MEKNTGGGLRKGTWTQEEDDLLRARVHNYGEGKWHLVPQRAGLKRCRKSCRMRWLNYLKPNINRTSFNEDEVDMIRRWSLIAGRLPGRTANNVKNFWHTNMCNRKEKGESQETKAKEVVMHNNVEKTTTEEVKPHVVIKPQPHTFSKNSPWLRRNNNNKVVCASEDDAAARTSAGDFKEGIAEPSAAADFTLRDHHQSEEWWESLMDKEVDEGQFGDFAMKLWDYDFLKMEGQFGEGKSCWGHCSRKF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1415 248 SMART sant 63 103 IPR001005 -
Acco05g1415 248 SMART sant 10 60 IPR001005 -
Acco05g1415 248 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Acco05g1415 248 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 8 182 - -
Acco05g1415 248 FunFam Myb transcription factor 11 63 - -
Acco05g1415 248 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Acco05g1415 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Acco05g1415 248 Gene3D - 6 64 - -
Acco05g1415 248 SUPERFAMILY Homeodomain-like 11 100 IPR009057 -
Acco05g1415 248 CDD SANT 13 58 IPR001005 -
Acco05g1415 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 105 IPR017930 -
Acco05g1415 248 Gene3D - 71 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1415 Acco-ChrAcco05 29804739 29805772 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1415 8 210 MYB Transcription Factor Family AT1G66370 41.096 1.20e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g1415 Myb_DNA-binding 2.3e-14 CL0123