Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1413 ATGGCAATGAGGCCACGCAAGCTTGCACGAGGCTTGAAATTAATGGAGAAGAACACAGGTGGTGGGTTGAGGAAAGGGACCTGGACCCAAGTGGAAGACGACCTTCTCAGAGCTTGCGTTCACAACTATGGAGAAGGAAAATGGCATCTTGTTCCTCAAACAGCTGGCTTGAAGAGATGTAGGAAAAGCTGCAGAATGAGATGGTTGAATTATCTGAAACCCAACATCAACCGAACAAGCTTCAATGAAGACGAGGTTGATATGATTCGAAGGTTCCATAAACTTCTCGGCAACAGATGGTCATTGATAGCTGGAAGGCTACCAGGAAGAACAGCGAACGACGTGAAGAACTTCTGGTACACCAACATGCGCAATAGGAAGAAGAAAGAAGAAAGCCAAGAGGCAAAAGCAAAAGAGGTGGTGATGCATAATAATGTAGAGAAGACGACAACAGAAAAAGTAAAATCACACGTGGTGATAAAACCTCAGCCTCATACTTTCTCTAAGAATTCGCCGTGGCTGAGGAGAAATAATAATAATAATAATAAGGTTGTTTCTGCAAGTGAGGGTGATGCTGCAGCTAGAACTATTTCAGGTGATTTAAAAGAGGGTATTGCAGAGCCATGTGCTGCTGCTGATTTTACGCAGAGAGATCATCATCAGTCTGAAGAGTGGTGGGAGAGTTTAATGGACAAGGAAGTAGTAGAGCTGTTTGGAGATTTCGCCATGGAGCTTTGGGACTATGACTTTCTAAAACTGGGAGGTCAATTTGGGGAAGGCAAGAACTGTTGGGGTCACTGTTCGTGTAAGTTCTAA 816 0.44 MAMRPRKLARGLKLMEKNTGGGLRKGTWTQVEDDLLRACVHNYGEGKWHLVPQTAGLKRCRKSCRMRWLNYLKPNINRTSFNEDEVDMIRRFHKLLGNRWSLIAGRLPGRTANDVKNFWYTNMRNRKKKEESQEAKAKEVVMHNNVEKTTTEKVKSHVVIKPQPHTFSKNSPWLRRNNNNNNKVVSASEGDAAARTISGDLKEGIAEPCAAADFTQRDHHQSEEWWESLMDKEVVELFGDFAMELWDYDFLKLGGQFGEGKNCWGHCSCKF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1413 271 Gene3D - 79 156 - -
Acco05g1413 271 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Acco05g1413 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 127 IPR017930 -
Acco05g1413 271 CDD SANT 80 123 IPR001005 -
Acco05g1413 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 76 IPR017930 -
Acco05g1413 271 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Acco05g1413 271 CDD SANT 27 72 IPR001005 -
Acco05g1413 271 SUPERFAMILY Homeodomain-like 23 119 IPR009057 -
Acco05g1413 271 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 22 229 - -
Acco05g1413 271 Gene3D - 25 77 - -
Acco05g1413 271 FunFam Myb transcription factor 25 77 - -
Acco05g1413 271 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Acco05g1413 271 Pfam Myb-like DNA-binding domain 78 121 IPR001005 -
Acco05g1413 271 SMART sant 77 125 IPR001005 -
Acco05g1413 271 SMART sant 24 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1413 Acco-ChrAcco05 29748860 29750677 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1413 22 171 MYB Transcription Factor Family AT1G66370 58.940 5.09e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g1413 Myb_DNA-binding 3.3e-13 CL0123