Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1411 ATGCTCAACAATACTTGTTACTTATCCTTAATCATTATCTTCATTCTAAGACACATCTGTATTATAAGGCGGCCGAAGAAGCAACTAAATTTGCGGTGCACACAGAGTGAGCAATTGACTGTGAAGCTGATGGAGAAGCGTCTCGTAGTTCATGTCAAACGAGGCTTGAATCTTGCCATCAGAGACGCCACAAGCAGCGATCCTTACGTTCTCATCAAAATGGGCAACCAGAAATTAAAGACTCGAGTGGTGGAGAAGAATATCAATCCTGAGTGGAATGAAGATTTGGCCTTTTCCATTTCAGATCCACATCTCCCAGCCCATCTTTTTGTGTATGACAAGGACACATTTTTTGATGACAAAATGGGGGAGTCTGAGTTTGACATTAATCCATTTCTTGAAGCCGTGAAGACCCGGCGGTTGGTGGAAGAAGGCGTGCAGGATGGAACAATCATCACAACAATTGAACCGAACCGGCGAAACTGTCTGGCTGAGGAGAGCCAGATTGTGTGGAAAGATGGCAAAGTTGTTCAGAACATGCTTCTTAGGCTGAAGAATGTGGAATGTGGGGAAGTAGAGCTCCAATTATCAATGGAGAACATGTTGGGTCTGCTCAGAATCCGGGTCCAGAGAGGTGTGAATCTTGCTATCAGAGATATCTTCTCCAGAAGCAGTGATCCTTGTGTTGTCTTCCAAATGGGCAAGCAGAAATTGAAGACTCGAGTAGTGAGGAGGAGTCTCAATCCTGAGTGGAATGAAGAGTTAACGTTATGTATTTCAGATCCTCCTCTCCCAGTCCAACTTTTTGTGTATGACCGAGACATTGGTTCTGATGACAAGTTGGGGGAGGCTGAGTTGGACATTAATCCCTTTGTCGAAGCTGTGATGAAGCAGCAGCCAGGTGGCCTGCCAAGTGGAGGAGCTATCCTTGAAAGAATAAAACCGAACCGGGGAAACTGTTTGGCTGAAGAAAGCCAAATTGTGTGGAAAGATGGCCGAATAGTGCAAGACTTGGTTCTTAGGCTAAAAAATGTGGAATCTGGTGAAGTAGAGCTCCAATTGTATTGGGTTCGCATTGCTCCTTCCAACACCACCCTGTAG 1101 0.4514 MLNNTCYLSLIIIFILRHICIIRRPKKQLNLRCTQSEQLTVKLMEKRLVVHVKRGLNLAIRDATSSDPYVLIKMGNQKLKTRVVEKNINPEWNEDLAFSISDPHLPAHLFVYDKDTFFDDKMGESEFDINPFLEAVKTRRLVEEGVQDGTIITTIEPNRRNCLAEESQIVWKDGKVVQNMLLRLKNVECGEVELQLSMENMLGLLRIRVQRGVNLAIRDIFSRSSDPCVVFQMGKQKLKTRVVRRSLNPEWNEELTLCISDPPLPVQLFVYDRDIGSDDKLGEAELDINPFVEAVMKQQPGGLPSGGAILERIKPNRGNCLAEESQIVWKDGRIVQDLVLRLKNVESGEVELQLYWVRIAPSNTTL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1411 366 Pfam C2 domain 203 290 IPR000008 -
Acco05g1411 366 Pfam C2 domain 47 132 IPR000008 -
Acco05g1411 366 Coils Coil 363 366 - -
Acco05g1411 366 CDD C2_ArfGAP 48 190 - -
Acco05g1411 366 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 48 198 IPR044562 -
Acco05g1411 366 SMART C2_3c 204 300 IPR000008 -
Acco05g1411 366 SMART C2_3c 47 141 IPR000008 -
Acco05g1411 366 ProSiteProfiles C2 domain profile. 188 303 IPR000008 -
Acco05g1411 366 Gene3D C2 domain 28 156 IPR035892 -
Acco05g1411 366 Gene3D C2 domain 185 360 IPR035892 -
Acco05g1411 366 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 185 292 IPR035892 -
Acco05g1411 366 ProSiteProfiles C2 domain profile. 23 142 IPR000008 -
Acco05g1411 366 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 47 134 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1411 Acco-ChrAcco05 29691203 29698769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1411 237 357 C2H2 Transcription Factor Family AT1G70790 55.285 4.79e-37 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1411 05 29691203 29698769 Acco05g1411 05 29691203 29698769 ECH
Acco11g0148 11 1734137 1736147 Acco05g1411 05 29691203 29698769 ECH