Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco05g1410 | ATGGAGAACCTGTTGGGTCTGCTAAGAATTCGCGTCCAGAGAGGGGTGAATCTCGCTGTTAGAGATGTTGTAAGCAGCGATCCTTACGTTGTCATCAAAATGGGCAAGCAGAAACTGAAGACTCGAGTGGTAAAACAGGATATCAATCCTGAGTGGAATGATGAATTGACCTTATCTATTTCAGATCCTCATCTCCCAGTCCATCTGCATGTGTATGACAAAGACAGATTCAGTTTTGATGACAAAATGGGGGAGGCTGAGTTTGACATTAATCCCTTTATCGAAGCTGTGAAGATGCGATTACAAGACCTCCCAGACGGGACCATTGTCACGAGAATTCTCCCGAACCGACAAAACTGTCTTGCTGAAGAGAGCCATATCCTGTGGAAAGAAGGCAAAGTTGTTCAAAACATGGTTCTAAGACTGAAAAATGTAGAGTCAGGGGAAGTGGAGCTCCAATTGCAATGGATTGACATTCCTGGTTCCAGGGGTCTGTAG | 498 | 0.4478 | MENLLGLLRIRVQRGVNLAVRDVVSSDPYVVIKMGKQKLKTRVVKQDINPEWNDELTLSISDPHLPVHLHVYDKDRFSFDDKMGEAEFDINPFIEAVKMRLQDLPDGTIVTRILPNRQNCLAEESHILWKEGKVVQNMVLRLKNVESGEVELQLQWIDIPGSRGL | 165 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco05g1410 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Acco05g1410 | 165 | CDD | C2_ArfGAP | 5 | 148 | - | - | |
| Acco05g1410 | 165 | Gene3D | C2 domain | 4 | 160 | IPR035892 | - | |
| Acco05g1410 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 144 | IPR035892 | - | |
| Acco05g1410 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
| Acco05g1410 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 3 | 163 | IPR044562 | - | |
| Acco05g1410 | 165 | Pfam | C2 domain | 6 | 92 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco05g1410 | Acco-ChrAcco05 | 29688304 | 29690844 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco05g1410 | 38 | 165 | C2H2 Transcription Factor Family | AT1G70790 | 60.769 | 1.52e-53 | 165 |