Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1400 ATGAAGAGAGATTACCCAGATAACAGCACAATTGGTAGTGGTGGTGTGAAGGCTGAATGTTCGTCAATGTCTAGTGGAAAGATGAAGATGTGGGAGGATGGGCTCGATGGTTCAGGCGGGACGGATGAGTTGCTGGCGGCTTTAGGCTACAAGGTCCGGTCGTCGGACATGGCGGATGTGGCCCAGAAGCTTGAGAAGCTTGAGATGGTTATGGCGACATCTCAGGAAGATGGGATATCTCATCTTGCTTCTGACACTGTCCACTATGACCCCACCGATCTCCATGGTTGGGTTCAAAGCATGCTTACCGAGCTCGATGGTTCACTCAATTGTCTCGATCCGTCGACGCTGTTGGCCAACCAACAAATTACTGACAATATTCTAGCTCCCGCTGGCTCCTCCGTCGTATCCACTGTGAATTTCTCTAACTGTCAGCAGCAGATTGGGAATCTTTCCACCGTTTACCACGATGATTCCGAGTACGACCTCCGAGCAATTCCTGGCAAGGCGGCCTTCCCACAAAGCAAAACGACAGATAGTGAAAATAGCCCCAAGCGATTGAAAACTTCACCATCAACTGAATCTGTCCCGTCGCCGCCCGCACCGTTGCCTTCGCCGACAACTGTACCAGAGCAAGCGCGTCCGGTAGTTCTCGTTGACTCCCAGGAAAACGGGGTGCGTCTCGTGCACGCGCTGATGGCATGTGCGGAGGCGGTTCAGCAAAACAATTTGAAGCTGGCGGAAGCACTTGTGGAGCACGTGGACCGGCTAGCCGCGTCTCAAGCCGGAGCAATGAGGAAGGTGGCTTCCTGCTTTGCTCAAGCTTTAGCTCAACGGATTTACGGAATCTCACAATCGTCCATTGATTCGCCTTTCTCCGATGTGCTCTATATGCATTTCTATGAGTCCTGCCCTTACCTTAAATTCGCCCATTTCACGGCGAACCAAGCTATCCTTGAAGCGTTCGCCACCGCTGACAGAGTTCACGTCATCGATTTCGGGCTCAAGCAGGGGATGCAATGGCCGGCATTAATGCAAGCCCTTGCATTACGACCCGGTGGTCCTCCGACGTTCCGCCTCACCGGAATCGGACCTCCGCAACCGGACAACACCGATGCTCTTCAACAAGTCGGGTGGAAATTGGCGCAATTGGCCAAAACAATCGGTGTCCAATTCGAATTCCGCGGGTTCGTCTGCAAAAGCTTGGTGGATCTCGAGCCGTCGCTCATCGAGATTCGACCCGGAGAAGCAGTTGCGGTTAACTCCGTTTTCGAACTCCACGAGCTCCTGGCCCGACCCGGTGCCATCGACAAGGTCTTGAACACGATCAAGGCTGTGAATCCCAAGATCGTGACTGTGGTGGAGCAAGAAGCAAACCACAACGAACCGATTTTCTTGGACCGTTTCACAGAAGCACTACACTACTACTCAACCATTTTTGACTCACTAGAGGGCTCGTCATCGTCATCGGGGTTATCACCGGCGGCAAGGCAGGACGTGCTGATGTCGGAGCTGTATCTAGGGAGACAGATATGCAACGTGGTGGCGGGTAAAGGGTCCGAGCGAGTGGAGAGGCACGAGACACTGAGTCAGTGGAGGGGTCGGATGGGATCGGCCGGTTTCGAACCGGTTCACCTGGGTTCGAACGCGTTCAAGCAAGCCAGCATGTTATTGGCAGTGTTCGCCGGAGGAGATGGGTACAGGGTGGAAGAGAACAAAGGTTGCCTTCTCCTAGGGTGGCACACTCGGCCCCTCATAGCCACGTCGGCTTGGAAAATTCCGGCCGGCGAACTTCAGTGA 1800 0.5394 MKRDYPDNSTIGSGGVKAECSSMSSGKMKMWEDGLDGSGGTDELLAALGYKVRSSDMADVAQKLEKLEMVMATSQEDGISHLASDTVHYDPTDLHGWVQSMLTELDGSLNCLDPSTLLANQQITDNILAPAGSSVVSTVNFSNCQQQIGNLSTVYHDDSEYDLRAIPGKAAFPQSKTTDSENSPKRLKTSPSTESVPSPPAPLPSPTTVPEQARPVVLVDSQENGVRLVHALMACAEAVQQNNLKLAEALVEHVDRLAASQAGAMRKVASCFAQALAQRIYGISQSSIDSPFSDVLYMHFYESCPYLKFAHFTANQAILEAFATADRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAKTIGVQFEFRGFVCKSLVDLEPSLIEIRPGEAVAVNSVFELHELLARPGAIDKVLNTIKAVNPKIVTVVEQEANHNEPIFLDRFTEALHYYSTIFDSLEGSSSSSGLSPAARQDVLMSELYLGRQICNVVAGKGSERVERHETLSQWRGRMGSAGFEPVHLGSNAFKQASMLLAVFAGGDGYRVEENKGCLLLGWHTRPLIATSAWKIPAGELQ 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1400 599 SMART DELLA_2 42 116 - -
Acco05g1400 599 FunFam DELLA protein GAI 40 105 - -
Acco05g1400 599 MobiDBLite consensus disorder prediction 167 210 - -
Acco05g1400 599 Coils Coil 57 77 - -
Acco05g1400 599 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 185 588 IPR005202 -
Acco05g1400 599 Gene3D - 40 105 IPR038088 -
Acco05g1400 599 ProSiteProfiles GRAS family profile. 219 592 IPR005202 -
Acco05g1400 599 MobiDBLite consensus disorder prediction 195 209 - -
Acco05g1400 599 MobiDBLite consensus disorder prediction 173 194 - -
Acco05g1400 599 Pfam Transcriptional regulator DELLA protein N terminal 42 107 IPR021914 -
Acco05g1400 599 Pfam GRAS domain family 228 592 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1400 Acco-ChrAcco05 29505431 29507230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1400 1 593 GRAS Transcription Factor Family AT2G01570 58.039 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco05g1400 GRAS 2.2e-136 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1400 05 29505431 29507230 Acco05g1400 05 29505431 29507230 CCT
Acco05g1400 05 29505431 29507230 Acco05g1400 05 29505431 29507230 ECH
Acco05g1400 05 29505431 29507230 Acco08g0159 08 1033987 1036311 ECH