Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1385 ATGGGAAGGCAACCTTGCTGTGACAAAGTTGGATTGAAGAAAGGTCCTTGGACTGCTGATGAAGACAAGAAACTCATTAACTTCATCCTCACCAATGGGCAATGTTGCTGGAGGACTGTCCCTAAGCTTGCAGGGCTATTGAGATGTGGGAAAAGTTGCAGGCTGAGATGGACCAATTACCTCAGACCAGACTTGAAGAGAGGTCTTCTTTCTGAATATGAAGAGAAAATGGTGATTGATCTCCACGCTCAACTTGGCAACAGATGGTCTAAGATTGCCTCTCATCTTCCGGGAAGGACTGATAATGAGATCAAGAACCATTGGAACACACACATCAAGAAGAAGCTCAAGAAAATGGGAATTGACCCTGTTACTCACAAGCCTCTCTCTGATCAACAACAAACCCAGAATAATCCCTCATCACGGATTAATCAAGTTCAGATACAACAAAATCAGCAGCAACCTGTGACAACTAGCCTCAAGTTGGATCAAAATGGAGAACCGGAGAAGGTAGAGACCTCATATGAGTCATCATCAACCTTAACTGAATCGAAAGAGCACAACAAGGTTGAAACTCCAACATTTGACGATATCATGAACGGTTTCTGTACTGATGAGGTTCCATTAATTGAACCTGATGAAATTCTAATGCCCTCTGGTCCTACTCCTTCGTCTTCTTCATCGTCCTCCTCCTCTTCTTCTTATTCAAATTCTTCCAACTTCCTCGACGACCTGGAGCTCCCAGGATTCGAGTGGGCTTGTAATTACAGTGACGACAACAGCAACAACAACAACAGTATTATGGGATTGTGGGATGGTGATGATGATTTGATGAGCGGTTGGGACTTGCTTTTGAATGATGATGACGATGTTGTAGACAGGAAGATGGAAGATTTTGATTCTGCTCTCAAACAATGTCCTAGAATGGTCATGGATCAAGAATCTTGGGCATATGGGTTGTTTTGA 966 0.4317 MGRQPCCDKVGLKKGPWTADEDKKLINFILTNGQCCWRTVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKPLSDQQQTQNNPSSRINQVQIQQNQQQPVTTSLKLDQNGEPEKVETSYESSSTLTESKEHNKVETPTFDDIMNGFCTDEVPLIEPDEILMPSGPTPSSSSSSSSSSSYSNSSNFLDDLELPGFEWACNYSDDNSNNNNSIMGLWDGDDDLMSGWDLLLNDDDDVVDRKMEDFDSALKQCPRMVMDQESWAYGLF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1385 321 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco05g1385 321 FunFam MYB transcription factor 11 67 - -
Acco05g1385 321 Gene3D - 70 154 - -
Acco05g1385 321 CDD SANT 16 61 IPR001005 -
Acco05g1385 321 FunFam MYB-related transcription factor 70 130 - -
Acco05g1385 321 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Acco05g1385 321 MobiDBLite consensus disorder prediction 123 197 - -
Acco05g1385 321 MobiDBLite consensus disorder prediction 127 164 - -
Acco05g1385 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco05g1385 321 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Acco05g1385 321 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco05g1385 321 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 228 - -
Acco05g1385 321 SMART sant 66 114 IPR001005 -
Acco05g1385 321 SMART sant 13 63 IPR001005 -
Acco05g1385 321 CDD SANT 74 112 IPR001005 -
Acco05g1385 321 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco05g1385 321 Gene3D - 11 67 - -
Acco05g1385 321 MobiDBLite consensus disorder prediction 219 238 - -
Acco05g1385 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco05g1385 321 MobiDBLite consensus disorder prediction 213 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1385 Acco-ChrAcco05 29292690 29293951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1385 1 321 MYB Transcription Factor Family AT5G16600 48.023 2.88e-102 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g1385 Myb_DNA-binding 5.6e-12 CL0123