Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1375 ATGTCTCTGCGTCTGGTAGTAGCAAATATACTCAAAAAGTTTCGTTTTCCTCCTCCCAATGCTTCTTCTACTTCTGCAATAACCTCTAATACGTTGCCCATCTCACTACCTGGCAAAAGTATTACTTTTCATTGGCATCGAACTGGTGCACATGGTTGGAAGACGGGCTCTAGGGGTCCTTTCCCATGGATGGTGATATATGGACATCTTGCATTAATTATTGGCATTAATGCCAACCCTGTTTTTGCAAAAGATGCATCAACAGAAGCAGTTTTTGATAGTGACACTGAAAAGGAAGATATAACTGGACTGCAAAAAATTGAGGATGGCTCTGTAGCATCGAATATACACACATCAAAATGGAGGGTCTTTACTGATAAAGGGAGAGAATTTTTTCTTCAGGGAAAAATAGATGAAGCTGAAAAGCTCTTCCTTTCTGCAGTACAAGAAGCTAGAGAAGGTTTTGGCCAGAGAGACCCACATGTTGCATCTGCATGCAACAATCTGGCTGAGTTGTACAGAGTCAAGAAGGCTTTTGACAAAGCAGAGCCGCTGTATTTAGAAGCTATGAGCATATTGGAGGAATCTTTTGGACCTGAAGATATACGGGTGGGAGCTGCTGCTCATAACCTTGGGCAGTTCTTCCTTGGACAGCGGAAGTTGGAAGAAGCTCATGTTTACTACTCGGTAAATTATTATATAAAAAGGCGGGTTTTGGGATATAACCATCCAGACTGTTCTGATACATTGTATCATCTAGGAGTGGTGCTGTATCTTCAAGGAAAGGAAGGGGATGCTGAGGCCTTTATTCAGGACTCTATAAGAATGCTAGAGGAAGGTGGTGAAGGGGAGTCCATTATATGCTTTAGAAGACTTCGATACCTTTCTCAGATATATATGAAATTAAATCGACATGCTGAAGCTGAGATGATTCAGAGAAGGATTCTACATAAAATGGAACTATCAAAGGGGTGGAATTCTCTTGAAACTATCGCTGCGGCTGAGAGTTTGGCTCTGATTCTTCAAGCATCAAATAATTTGAAAGATTCACAAGAGCTTCTTGAAAGATGTCTTAATGCTCGAAAAGCCATACTTCCCCACGACCATATTCAGATTGGTGCTAACCTGCTTCATCTAGCAAGGGGAGTGGTGCTCAACAGCAGCCAACTGCAGAAGTGTGATGTTTCTGGTGAAGCTGAGCTTGATAGGGCAAAGGATCAATTGAATGATTCCATAAGGATTGCACGTCAAATTTTAAATAAATTACTGAAACAAAAAGTCAACAAAAAAGATTACAGTTCACTAGGACGTTCTACAAAGGAAAGACAAGCGGCATTAATCATACTGTTGCAATCGCTCAGCCTTTTGGCGTCATTGGAGTTACCTAAGCAAGAATTGCTGGGAACTCAGGAGGAGCATATAAATCTTGAAGCTCGGAAGGCACTTGTTCAATGTGTTTCCGCTTATAGGGAGTATGTATCAGAGAAGTCAGTTGCTGATTCACCTGAAATAAAGAAAGAGTACCTTTCATGTTTAAAGCGTGCTCAAGACTTGCTTGGTGGTAAATTTGCTGAGGAGCCAACCAATTGA 1590 0.4126 MSLRLVVANILKKFRFPPPNASSTSAITSNTLPISLPGKSITFHWHRTGAHGWKTGSRGPFPWMVIYGHLALIIGINANPVFAKDASTEAVFDSDTEKEDITGLQKIEDGSVASNIHTSKWRVFTDKGREFFLQGKIDEAEKLFLSAVQEAREGFGQRDPHVASACNNLAELYRVKKAFDKAEPLYLEAMSILEESFGPEDIRVGAAAHNLGQFFLGQRKLEEAHVYYSVNYYIKRRVLGYNHPDCSDTLYHLGVVLYLQGKEGDAEAFIQDSIRMLEEGGEGESIICFRRLRYLSQIYMKLNRHAEAEMIQRRILHKMELSKGWNSLETIAAAESLALILQASNNLKDSQELLERCLNARKAILPHDHIQIGANLLHLARGVVLNSSQLQKCDVSGEAELDRAKDQLNDSIRIARQILNKLLKQKVNKKDYSSLGRSTKERQAALIILLQSLSLLASLELPKQELLGTQEEHINLEARKALVQCVSAYREYVSEKSVADSPEIKKEYLSCLKRAQDLLGGKFAEEPTN 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1375 529 Gene3D Tetratricopeptide repeat domain 284 458 IPR011990 GO:0005515
Acco05g1375 529 SUPERFAMILY TPR-like 117 229 IPR011990 GO:0005515
Acco05g1375 529 SUPERFAMILY TPR-like 242 360 IPR011990 GO:0005515
Acco05g1375 529 Coils Coil 405 425 - -
Acco05g1375 529 Pfam Tetratricopeptide repeat 206 279 - -
Acco05g1375 529 Gene3D Tetratricopeptide repeat domain 124 283 IPR011990 GO:0005515
Acco05g1375 529 Pfam Tetratricopeptide repeat 330 370 - -
Acco05g1375 529 Pfam Tetratricopeptide repeat 162 200 - -
Acco05g1375 529 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 522 - -
Acco05g1375 529 SMART tpr_5 247 280 IPR019734 GO:0005515
Acco05g1375 529 SMART tpr_5 163 196 IPR019734 GO:0005515
Acco05g1375 529 SMART tpr_5 121 154 IPR019734 GO:0005515