Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1358 ATGACAACCCGAGGCTTCGGATATCCGGGCCCCACCTCCATGTGCACTTCTGTTCCTTCTTCTCCTTTCTCGGCTTTCTCATTACTGTCTGCTCTGGTTTCCAGCTATACCCTTTACCGCCATTTACTCATTTCTTCTTCTTCTTCTTCTTCTGTTCTTCTCTCTCGTTATTTCCTTCGCTTTCTCTCTTTGTTCCACTGGGTAACGAAGATGAGGGAACAATCGCACTTGAAGTTCGAGCCCTTACTCATTTTCCTTTCTGGGCTACTTTCAGTCTTCGTCTTCGTTGAGTCTCAAGCAAACCCTAGCCCAGATGCTCCTGTAATGGAAGCTCTCAAGAAAAGCCTCAACGTCCCTGATTCTATTGGATGGTCTGATTCAGACCACTGCAAGTGGAACCATGTTGGCTGCGATGAAGGTCGGGTCACGCGGATCCAAATCGGACGTCTAGGTCTTCAAGGTACGCTTCCTCCGAGTCTTGGAGATCTCACTGAGCTACAGCGCTTGGAACTTCAGTATAATAACATTTCCGGTCCTCTTCCTAGCTTAAAGGGTTTGGGTTCGTTGCAAGTGCTTATTCTTAGTAACAACCAATTTAGTTCGATCCCTAGAGATTTTTTTACTGGCATGTCTCAACTTCAATCCGTGGAGATCGACAAGAACCCATTTCAGGAATGGGAGATACCTGAAAGTCTTCGAGACGCTTCGTCTCTTCAGAACTTCTCGGCCAACTCGGCTAATATCACTGGCAAGATACCAGATTTTCTTAATGGAAATGTGTTTCCTGGTTTGGTCCTTTTGCATTTGTCCTTCAATAACCTCGAGGGTGGGTTTCCGGCGAGCTTTTCTGGTTTGCCGATCGAGACTTTGTGGCTTAATGGGCAGACAGGTAAACTTAACGGAACCATAGATTTTATGCAGAATATGAGTTCCTTGAAGGAGGTTTGGCTGCATTCAAATGCATTTTCGGGTCCATTACCCGATTTTTCTGGCTTGAAGAGTTTGGAGACCCTGAGTTTAAGGGATAATTCGTTTACTGGTCCTGTTCCTTTGTCACTGATGAGTCTTAAATCGTTGAAAGTTGTTAATTTGACTAATAACTTACTTCAAGGGCCTGTGCCAGTGTTCAGTCCAGGAGTTGAAGTGGATATGAGTAAGGATTCAAATGACTTTTGCTTGCCAAGTCCTGGTGATTGTGATCGTCGGGTGAATATTCTGCTTTCCATTGTTAAACTTATGGGATATCCTCAAAGATTTGCTAAGGAATGGAAGGGCAATGATCCATGTAATGATTGGCTTGGTATTACCTGTAGTAATGGGAACATTACTGTTGTTAATTTTCAGAGGCTGGGTCTGTCTGGTACCATATCCCCCGAGTTTGCCTCAATCAAATCATTGCAAAGAATCATGCTTGCTGATAACGATCTCACCGGCACGATTCCAGCGGAGCTCACTACACTTCCTATGCTCACTGAACTGAATCTCGAGAATAATCAGCTTTATGGAAAGGTCCCATCTTTTAGGAGTAATGTAATCGTTAACACTAAGGGTAACAAGGACATAGGCAAGGATAGAAGCAGTTCAACCCCTCTAGGTTCAGCATCTCCCAACCCCACAGGTCATGGTACAACAGGAGAAGATGGTGGGATTTCTGCAAATGGTGGCAAAAAATCTTCTCATGTTGCTGTAACTGTAATTGCTGTAGTTGGGGGTGTATTTTTGGTTTCAATTATTGGTGTCATAGTTTTCTGCTTGTATAGAATGAAGCAAAAGAAGTTAAGCAGGGTACAGAGCCCTAATGCTCTGGTAATTCACCCTCGTCATTCTGGATCAGATAACGAGAGTTTGAAAATAACAGTTGCGGGCTCAAGTGTCAGTGTTGGCACCGCTAGTGAAACTCAAACTGTACCTGGCAGTGAGGCAGGAGGAGACATCCAAATGGTTGAAGCTGGCAACATGGTCATTTCCATACAAGTCCTTCGGAACGTGACTGACAATTTCAATGAAAAGAATATATTGGGACAAGGTGGTTTTGGAACGGTATACAAAGGTGAACTTCATGATGGCACCAAAATTGCAGTGAAAAGAATGGAGTCAGGAGCAATAATTGGAAAGGGTGCATCGGAATTTAAGTCAGAGATTGCTGTTTTGACAAAAGTTCGCCACCGGCATCTTGTTGCACTTCTTGGCTACTGCTTGGATGGGAATGAAAAACTTTTGGTGTATGAATACATGCCTCAGGGTACACTAAGTAGGCATCTGTTTAACTGGCCAGAAGAAGGATTACAACCCTTGGACTGGAATAGGAGGTTGACCATTGCCTTAGATGTGGCTAGGGGTGTTGAGTACCTTCATGGCTTAGCCCATCAAAGCTTTATACATAGAGACTTAAAGCCCTCAAACATTCTTCTTGGAGATGATATGAGAGCAAAGGTTGCAGATTTTGGTCTTGTCCGTCTTGCTCCAGAAGGAAAAGCCTCAATAGAAACACGAATTGCTGGAACATTCGGATACTTGGCACCAGAATACGCAGTTACTGGCCGTGTGACGACTAAAGTAGATGTATACAGTTTTGGGGTGATACTGATGGAAATCATAACTGGAAGGAAAGCGCTTGACGAAACCCAACCCGAGGACAGTATGCACCTTGTAACATGGTTCCGCAGAATGTACATAAACGAAGAATCATTTAGCAAGGCCATTGATCCAACGATTGATCGCAACGAGGAAACTCTTGCTAGCATTCGCACAGTGGCAGAACTAGCAGGCCACTGTTGTGCACGAGAGCCATATCAGAGGCCAGACATGGGTCACGCCGTGAATGTCCTTTCCTCTTTGGCAGAACTCTGGAAGCCATCTGACCAGAGTTCTGAAGATATATATGGGATTGACCTTGACATGTCTTTGCCTCAAGCCCTTAAGAAATGGCAGGCTTATGAAGGCAGAGGAGGAGGAGGAGGAGGCTCAGTGGACTCATCTTCTTCTTCACTCCTTCCAAGCCGGGACAACACGCAGACAAGCATACCGACACGCCCATATGGTTTTGCTGAGTCTTTCACATCAGCAGATGGGAGGTGA 3078 0.4483 MTTRGFGYPGPTSMCTSVPSSPFSAFSLLSALVSSYTLYRHLLISSSSSSSVLLSRYFLRFLSLFHWVTKMREQSHLKFEPLLIFLSGLLSVFVFVESQANPSPDAPVMEALKKSLNVPDSIGWSDSDHCKWNHVGCDEGRVTRIQIGRLGLQGTLPPSLGDLTELQRLELQYNNISGPLPSLKGLGSLQVLILSNNQFSSIPRDFFTGMSQLQSVEIDKNPFQEWEIPESLRDASSLQNFSANSANITGKIPDFLNGNVFPGLVLLHLSFNNLEGGFPASFSGLPIETLWLNGQTGKLNGTIDFMQNMSSLKEVWLHSNAFSGPLPDFSGLKSLETLSLRDNSFTGPVPLSLMSLKSLKVVNLTNNLLQGPVPVFSPGVEVDMSKDSNDFCLPSPGDCDRRVNILLSIVKLMGYPQRFAKEWKGNDPCNDWLGITCSNGNITVVNFQRLGLSGTISPEFASIKSLQRIMLADNDLTGTIPAELTTLPMLTELNLENNQLYGKVPSFRSNVIVNTKGNKDIGKDRSSSTPLGSASPNPTGHGTTGEDGGISANGGKKSSHVAVTVIAVVGGVFLVSIIGVIVFCLYRMKQKKLSRVQSPNALVIHPRHSGSDNESLKITVAGSSVSVGTASETQTVPGSEAGGDIQMVEAGNMVISIQVLRNVTDNFNEKNILGQGGFGTVYKGELHDGTKIAVKRMESGAIIGKGASEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLQPLDWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEIITGRKALDETQPEDSMHLVTWFRRMYINEESFSKAIDPTIDRNEETLASIRTVAELAGHCCAREPYQRPDMGHAVNVLSSLAELWKPSDQSSEDIYGIDLDMSLPQALKKWQAYEGRGGGGGGSVDSSSSSLLPSRDNTQTSIPTRPYGFAESFTSADGR 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1358 1025 Pfam Leucine rich repeat N-terminal domain 105 138 IPR013210 -
Acco05g1358 1025 Pfam Leucine rich repeat N-terminal domain 405 438 IPR013210 -
Acco05g1358 1025 MobiDBLite consensus disorder prediction 980 1025 - -
Acco05g1358 1025 SUPERFAMILY L domain-like 404 510 - -
Acco05g1358 1025 Gene3D Transferase(Phosphotransferase) domain 1 745 964 - -
Acco05g1358 1025 SMART serkin_6 667 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1358 1025 ProSiteProfiles Leucine-rich repeat profile. 188 209 IPR001611 GO:0005515
Acco05g1358 1025 MobiDBLite consensus disorder prediction 518 554 - -
Acco05g1358 1025 SMART LRR_typ_2 163 185 IPR003591 -
Acco05g1358 1025 SMART LRR_typ_2 261 284 IPR003591 -
Acco05g1358 1025 SMART LRR_typ_2 487 509 IPR003591 -
Acco05g1358 1025 SMART LRR_typ_2 186 209 IPR003591 -
Acco05g1358 1025 ProSiteProfiles Protein kinase domain profile. 667 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1358 1025 FunFam Receptor-like kinase TMK4 103 397 - -
Acco05g1358 1025 Pfam Leucine rich repeat 165 222 IPR001611 GO:0005515
Acco05g1358 1025 MobiDBLite consensus disorder prediction 524 546 - -
Acco05g1358 1025 Gene3D Phosphorylase Kinase; domain 1 628 744 - -
Acco05g1358 1025 ProSitePatterns Protein kinases ATP-binding region signature. 673 705 IPR017441 GO:0005524
Acco05g1358 1025 FunFam receptor protein kinase TMK1 745 962 - -
Acco05g1358 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Acco05g1358 1025 Pfam Protein kinase domain 667 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1358 1025 SUPERFAMILY Protein kinase-like (PK-like) 647 951 IPR011009 -
Acco05g1358 1025 PANTHER OSJNBA0070M12.3 PROTEIN 89 1025 - -
Acco05g1358 1025 MobiDBLite consensus disorder prediction 988 1014 - -
Acco05g1358 1025 Gene3D Ribonuclease Inhibitor 104 399 IPR032675 -
Acco05g1358 1025 FunFam Leucine-rich repeat receptor-like kinase 401 524 - -
Acco05g1358 1025 CDD STKc_IRAK 673 946 - -
Acco05g1358 1025 Gene3D Ribonuclease Inhibitor 400 525 IPR032675 -
Acco05g1358 1025 SUPERFAMILY L domain-like 111 376 - -
Acco05g1358 1025 FunFam receptor protein kinase TMK1 628 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1358 Acco-ChrAcco05 28734444 28737988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1358 154 949 Receptor kinase-like Gene Family AT5G07280 32.396 6.26e-89 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Acco05g1358 Pkinase 3e-46 CL0016