Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1355 ATGAGACCTAACTTGGATCTTGAAGTGGAGGCTTCTGCGGAAAATGAACCCGAAATTAGCAGCCAGGTTGCATCCAACATATTCATTCATGAAATATCTGCAGGTCCTTCTAGTGATAACAGCCTCAACAACACATCAGACAACACAAACAACATAGGATTTCAGCTAAACAATGCAGATCCTCTTTCACTTGACTTAACTCTCAGCTTCAATAACAACGTGCTAGGCCCCGCTGGAGACTCCTCTGTGGGGCTTTCATTCTCTAGCACTAGTGAGAGTAGCAACGAACCTGCCTCTCAAACCACATCGGCCCCCATCCAAAGAGTGTTCTCTTGCAACTACTGTCAGCGCAAGTTCTTCAGCTCGCAGGCTCTTGGTGGTCACCAGAACGCACACAAGAGGGAAAGAACACTTGCAAAGAGAGCCATGAGAATGGGGTTTTTCTCTGATAGGTATGCAAATTTAGCATCCCTCCCTCTTCATGGCTCTTTCAGGTCCTTAGGAATTAAAGCACACTCCTCAATTCACCATGGATTTTCACCATCAATGGTGAGGCCTTATGAGATGAAAACTAATGCGAGATTCGATGAAGGGTATGCCGGAATGCCTGTGTTCGTGGAGGATGATGAGGCTGAACTGCTATGGCCTGGTAGTTTCCGGCAGGTTGGAGAGGCAAGTGACAATGACGATAATGACGATCATCGTCATCATCAGAAGTTCGTGGTCACTGGAAGTTCAAATTTGAGTTTTGCAGAAGTGAGTCCAGAAGTACACCTTGAGCCAGAGGACTCAACAACACCAGATTTAACATTGAAGCTTTGA 822 0.4599 MRPNLDLEVEASAENEPEISSQVASNIFIHEISAGPSSDNSLNNTSDNTNNIGFQLNNADPLSLDLTLSFNNNVLGPAGDSSVGLSFSSTSESSNEPASQTTSAPIQRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSDRYANLASLPLHGSFRSLGIKAHSSIHHGFSPSMVRPYEMKTNARFDEGYAGMPVFVEDDEAELLWPGSFRQVGEASDNDDNDDHRHHQKFVVTGSSNLSFAEVSPEVHLEPEDSTTPDLTLKL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1355 273 MobiDBLite consensus disorder prediction 252 273 - -
Acco05g1355 273 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 137 IPR013087 -
Acco05g1355 273 FunFam Zinc finger protein 2 87 156 - -
Acco05g1355 273 ProSitePatterns Zinc finger C2H2 type domain signature. 112 132 IPR013087 -
Acco05g1355 273 Gene3D Classic Zinc Finger 88 153 - -
Acco05g1355 273 SUPERFAMILY beta-beta-alpha zinc fingers 108 137 IPR036236 -
Acco05g1355 273 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 42 199 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1355 Acco-ChrAcco05 28678632 28679453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1355 107 273 C2H2 Transcription Factor Family AT1G66140 50.777 4.63e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco05g1355 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1355 05 28678632 28679453 Acco05g1355 05 28678632 28679453 CCT
Acco05g1355 05 28678632 28679453 Acco05g1355 05 28678632 28679453 ECH