Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1353 ATGCCCTTGGAAGCAGGGATTTTCATAGAGCCACCTGCTTCTTCTTCGTCAACCTCTTCTTCTGGTACTCCTGATCTGTCCCTTCACATAAGCCCTCCTTCAACCTCTTCTTCTTTGATTTGCAGCAACACTAACAACAACTATGAAGCTCGGCACTATATTCCTTCTTCTTCTTCTCTCTCTCTCTCTCATCATGCCCACACTGAACTCTCACTCGCTACCAATTTCACCACTCCTAATTCAACCCAAGAACCATTAGTAACCCTCCACCACCATACCAAAAACAACAACATCAACCCTTATTTTCAGACCCACCACCACCATTTCCTCCACCAGAATATTAATAACCATGGAGGAATCTCATTGCTTGATGTCTCTCCTTCTTCTTCCTCCGAGGGATTGAGGCCCATCAAAGGGATTCCCGTCTATCACAACCGCTCGTTCCCTTTCTTGCCGGCGGTGGATAATCACCACCAGCAGCAGCAGCAAACCAAGATGTGCTTCTACAACCCTTCTTCTCCGTACATGGCGGTGGCGGCTGCCGGGGGCTTGGATCCCGTGTCGGCGGCATACAGGGCGGGCGGCAGGTTTAATAATGGGATTTCAAGAGATGCCTTCAAATCTCCCCATCATCAGTATGGGAACATGGTGGGACCATCTTCTTCTTCACATGAGGCTTGTTCGTCGTCTCCGAGCAGTACTGGGCTCATGATGAGATCCAGATTCTTGCCTAAGCTTCCCACTAAACGCAGCATGAGAGCTCCCAGAATGCGGTGGACCACCACCCTCCACGCTCGCTTCGTTCACGCCGTCGAGCTCCTCGGCGGCCACGAAAGAGCAACTCCGAAATCAGTTCTAGAGCTGATGGATGTGAAGGATCTTACCTTAGCTCATGTCAAAAGCCATTTACAGATGTATCGAACTGTGAAGACCACCGACAAGCCTGCAGCTTCTTCAGGCCACTCAGATGGGTCTGGAGAAGATGAAATATTTGCAGATCATAGAGGAAGCAGAACAGACAGGTCAGTGCAGCATGAAATGGACTACTCTTCTACTACCACTACACTATGGAGCAATTCTTCAAGTAGTAGAGAGCCATGGCTTCAAAATAGTACCAAAGACATGGATAGTCTGAGACCTGCCTTTCAGACACCACCATTATCATCAGCAGGGCATCAAATTCAGGAGTGTGATTCAAGGCATGTGAAGAACAACATATCAAGCTCTAATTTGGAGTGCAAGAACCCAAGCTTGGAGTTTACGTTAGGAAGACCAGATTGGGATGGACATGCCTAA 1296 0.4846 MPLEAGIFIEPPASSSSTSSSGTPDLSLHISPPSTSSSLICSNTNNNYEARHYIPSSSSLSLSHHAHTELSLATNFTTPNSTQEPLVTLHHHTKNNNINPYFQTHHHHFLHQNINNHGGISLLDVSPSSSSEGLRPIKGIPVYHNRSFPFLPAVDNHHQQQQQTKMCFYNPSSPYMAVAAAGGLDPVSAAYRAGGRFNNGISRDAFKSPHHQYGNMVGPSSSSHEACSSSPSSTGLMMRSRFLPKLPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDEIFADHRGSRTDRSVQHEMDYSSTTTTLWSNSSSSREPWLQNSTKDMDSLRPAFQTPPLSSAGHQIQECDSRHVKNNISSSNLECKNPSLEFTLGRPDWDGHA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1353 431 MobiDBLite consensus disorder prediction 1 37 - -
Acco05g1353 431 Gene3D - 254 311 - -
Acco05g1353 431 Pfam Myb-like DNA-binding domain 256 307 IPR001005 -
Acco05g1353 431 MobiDBLite consensus disorder prediction 346 371 - -
Acco05g1353 431 SUPERFAMILY Homeodomain-like 252 308 IPR009057 -
Acco05g1353 431 MobiDBLite consensus disorder prediction 311 371 - -
Acco05g1353 431 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 24 429 IPR044847 GO:0000976|GO:0006355|GO:0010158
Acco05g1353 431 MobiDBLite consensus disorder prediction 216 235 - -
Acco05g1353 431 MobiDBLite consensus disorder prediction 11 37 - -
Acco05g1353 431 MobiDBLite consensus disorder prediction 326 345 - -
Acco05g1353 431 FunFam Myb family transcription factor 253 311 - -
Acco05g1353 431 MobiDBLite consensus disorder prediction 407 431 - -
Acco05g1353 431 NCBIfam myb-like DNA-binding domain, SHAQKYF class 255 308 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1353 Acco-ChrAcco05 28611307 28615449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1353 1 427 G2-like Transcription Factor Family AT5G16560 42.004 4.56e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco05g1353 Myb_DNA-binding 2.2e-05 CL0123