Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1346 ATGGTTCTCTCAAAAACCTCCTCTCAGACCGACGTCTCTGTCCATTCCACCTTCGCTTCTCGCTATGTCCGCGCTTCTCTTCCCAGGTTCAAGATGCCGGAGGATTCGATTCCGAAGGAGGCGGCGTTTCAGATCATAAACGACGAGCTCATGCTGGACGGAAATCCCAGGCTGAATCTGGCCTCCTTCGTCACCACATGGATGGAGCCTGAGTGCGATAAGCTCATGATGTCCGCCATTAACAAGAACTACGTCGACATGGATGAGTACCCTGTCACTACCGAACTCCAGAATCGGTGCGTGAACATGATAGCTCATCTTTTCAATGCACCCCTCGGAGATTCAGAGGCAGCCGTCGGTGTCGGCACCGTCGGTTCATCGGAAGCCATAATGTTGGCCGGTTTGGCCTTCAAGAGAAAATGGCAGAACAAAAGAAAGGCCGAGGGAAAGCCCTACGACAAACCCAACATTGTCACCGGAGCCAATGTCCAAGTGTGCTGGGAGAAATTTGCGAGGTACTTTGAAGTGGAGCTCAAAGAGGTAAAACTGAGGGAAGGTTACTACGTAATGGACCCAGAAAAAGCAGTGGAGATGGTGGACGAGAACACCATCTGTGTCGCCGCCATCCTCGGCTCCACGCTGAACGGAGAATTCGAAGATGTGAAGCTCTTGAATGATCTACTCACCAAGAAGAACAGTGAGACTGGATGGGACACGCCTATTCATGTGGATGCTGCTAGCGGTGGCTTCATTGCACCATTCATATACCCAGAACTGGAATGGGACTTTAGGCTGCCGTTAGTGAAGAGCATCAACGTCAGTGGCCATAAGTATGGTTTGGTCTACGCCGGTATTGGGTGGGTCATCTGGAGGAGCAAGGTGGACTTGCCGGAGGAGCTCATCTTCCATATCAACTATCTCGGAGCCGACCAACCCACATTCACCCTCAACTTCTCCAAAGGTTCAAGTCAAGTTATTGCTCAGTACTACCAGCTCATTCGCTTGGGTTATGAGGGATACAGGAACGTAATGGAAAATTGCAGGGACAACATGCTTGTGCTGAAAGATGGACTTGAGAAGACAGGGAGGTTCAACATCGTATCAAAGGACGATGGTGTCCCACTGGTGGCTTTCTCTCTCAAAGAACACCACCATTTCAATGAGTTCCGAATTTCCGACCTGCTGAGGCGCTTCGGCTGGATCGTGCCGGCCTACACCATGCCCCCCGACGCCCAGCACGTGACCGTCCTCCGTGTTGTCATCCGTGAGGACTTCTCCAGAACCCTCGCCGAGCGTCTTGTGCTCGACATCCAGAAGGTCGTCCACGAGCTCGAGTTGCTGCCTCCCAGGGCGGCGGCTGCCAACACTGTCACGTTGGCCGAGCAACATGATGAGGTTGTGAACAATGGCAAGGTCGTGGTCTGCAAGAAGACTGAGTTGGAGACGCAGAGGGAGATCACTGATGTCTGGAAGAAGTTCGTATCCATGAGGAAGAAGAACAATGAAAAGATGAGTGGTGTTTGCTAA 1527 0.52 MVLSKTSSQTDVSVHSTFASRYVRASLPRFKMPEDSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMSAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTKKNSETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKVDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMLVLKDGLEKTGRFNIVSKDDGVPLVAFSLKEHHHFNEFRISDLLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDIQKVVHELELLPPRAAAANTVTLAEQHDEVVNNGKVVVCKKTELETQREITDVWKKFVSMRKKNNEKMSGVC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1346 508 Gene3D - 361 448 - -
Acco05g1346 508 FunFam Glutamate decarboxylase 66 360 - -
Acco05g1346 508 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Acco05g1346 508 FunFam Glutamate decarboxylase 1 65 - -
Acco05g1346 508 CDD DOPA_deC_like 59 439 - -
Acco05g1346 508 Gene3D - 66 360 IPR015421 GO:0003824
Acco05g1346 508 FunFam Glutamate decarboxylase 361 448 - -
Acco05g1346 508 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Acco05g1346 508 NCBIfam glutamate decarboxylase 16 445 IPR010107 GO:0004351|GO:0006536|GO:0030170
Acco05g1346 508 PANTHER GLUTAMATE DECARBOXYLASE 1 498 IPR010107 GO:0004351|GO:0006536|GO:0030170
Acco05g1346 508 Gene3D - 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1346 Acco-ChrAcco05 28471757 28477628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1346 1 508 Calmodulin-binding Proteins AT5G17330 82.480 0.0 878