Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1331 ATGGCACCAGTTTCGTTTCCACCAGGATTCAGATTCCACCCAACAGATGAAGAGCTCGTGGCTTACTATCTGAAAAGAAAGATTAATGGCCTCAAGATTGAGTTAGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAATCGCTGTTACCAGGGAAAGACTTGGAGTGGTATTTCTTCAGTCCAAGAGACAGGAAATATCCGAACGGATCAAGAACAAACAGAGCAACGAGATGTGGGTATTGGAAGGCGACAGGGAAAGATAGGAAAGTGAATTCACAGAGTAGGGCAGTGGGCATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCCCCTCATGGCTCTCGTACTGGTTGGGTCATGCACGAGTATCGTCTTCACGAACGAGAATGTCAACCTGCCTCTTCTGCCATGCAGGAGGCATATTCTCTGTGTCGAGTGTTCAAGAAGAGCGCGGTGATAAGTCCAAAGGTAGAAGAGGAGCACGTGAGGACCAGTTATAATAATGGGAATTATCATCATGATCATCACTATCGTTATCAGCAGCCGCAGCAGATGGGTAGTGATCAAACGTCATCCACCATTAATGAGCTTAATTACGGTGAGGGAAGAGGAGGCGAAGACTTGGACAGCTCAAATAATTACTTGATGGCGCCTTTTCATGATTCAGCCTACATGCACCACCCGAATAATGGGACAACCTTCAATAGTGTCAATAATAATAATAATCCAAGTTGGTCTCACTTCTTGTCTGATGATCTTTCTTTGTTAAGCCTTCCGACAACTTCTTCATTTCCCAACTATGCACCGATATCCTATCTTCCCTCCAAGGTAGACGTAGCTTTAGAATGTGCAAGGATGCAGCATAGGTTCAGTATGCCTCCATTGGAGGTGGAGGACTTCCCTCAAGTTGGAATTCCTGAACTGAAGATGCCACAACAACCTCATCATCATCATCATTCTGGTGCCATTATTGGAACCAGAACAACTGAAACCGATATTTTGCAGGAGATTCTATCAGTAGCTCATGCTTCTCAGGAACTCATTAATCACCCCATAAACTATTCACCCACCACCTTGGGCGGTGCCGGCGGCAACAGCAACGAAAACTATGCTCCTCATGAAGAAGAAAATGATGACTTCACTTTCATGGTGGGAAGAGGAAGTGGTGATCAGAACTATAACTACAACCACCAGGTGATGAGTGACTTGAGTTCCGTGATGAGAGGCATTAATAATGAGACTACTACTACTTCATGGGAGGATCAGAATACAGTCAGGTCAATAGAGATTTCAGATCTGGATGATGAGTTTAAGGCAGAGAGGATGGTGGAGAACTTGAGATGGGTTGGAATGTCAAGCAAAGATATGGACAAGACCTTTATGGAAGATCAAAAGATTGTTCCTGTTGAGGATATTACGAATTTCCAAATAAACAACGAAGACAATGAGTTGCGAGCAGAATCTGTGCAACACCAAAGCAACAACATGAATGACTTCGCATTGGGATTCATCAATTATGATGAACCAAATGAGAACTTCATAGATGAAGGTACTCCCATGGATGACTATTCAAGCTCTCCAAGCTGCTTTGAGGTTGTGGAGGAAGTAAAAGTCAGCCATGGAATGTTTGTGGCAACTCGCCAAGGGGCCGACACATTCTTTCATCAGATAGTCCCTTCACAAACCCTCAAGGTTCATCTCAACCCAGTAACGGCAAATAACACTAATCTCTCAGTAGAAAATGCAGAAATAGCACAGACAGATACAAAGGGAATGGAGAAGCAAGGGTCATACTTCACAAAACTGAAAGACTATGTGATGGGAAAGCTAATAGTGAAGCCTTCAAAGACAGCTACTAGTGCTATTATGCTCATATTTGCATTTCTCTTGATGCTTTGTGCTTCATATTTGGGGGAGCATGCACAAATCCTGAAACTAGATCAGGAAAATGAAGATGTCAAAGAGAAATATTGCTCTGGTGCAACAAGCATGAAGAAGAAATATTCCTCATGGGATGAGAAAGAAAGGGTTTGGTTTGTTGGTATCAAAAGTGGAAGAGGGTTTGGTGTGGTGTTGAAGAAGGTAGGGATTTTCCTTACAATTTCTTTGGCCCTTTGCACCATGTGGGCTAACCACATCACAGTTGATTAA 2175 0.4331 MAPVSFPPGFRFHPTDEELVAYYLKRKINGLKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATRCGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLHERECQPASSAMQEAYSLCRVFKKSAVISPKVEEEHVRTSYNNGNYHHDHHYRYQQPQQMGSDQTSSTINELNYGEGRGGEDLDSSNNYLMAPFHDSAYMHHPNNGTTFNSVNNNNNPSWSHFLSDDLSLLSLPTTSSFPNYAPISYLPSKVDVALECARMQHRFSMPPLEVEDFPQVGIPELKMPQQPHHHHHSGAIIGTRTTETDILQEILSVAHASQELINHPINYSPTTLGGAGGNSNENYAPHEEENDDFTFMVGRGSGDQNYNYNHQVMSDLSSVMRGINNETTTTSWEDQNTVRSIEISDLDDEFKAERMVENLRWVGMSSKDMDKTFMEDQKIVPVEDITNFQINNEDNELRAESVQHQSNNMNDFALGFINYDEPNENFIDEGTPMDDYSSSPSCFEVVEEVKVSHGMFVATRQGADTFFHQIVPSQTLKVHLNPVTANNTNLSVENAEIAQTDTKGMEKQGSYFTKLKDYVMGKLIVKPSKTATSAIMLIFAFLLMLCASYLGEHAQILKLDQENEDVKEKYCSGATSMKKKYSSWDEKERVWFVGIKSGRGFGVVLKKVGIFLTISLALCTMWANHITVD 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1331 724 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Acco05g1331 724 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Acco05g1331 724 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Acco05g1331 724 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 233 - -
Acco05g1331 724 FunFam Nac domain-containing protein 86 15 160 - -
Acco05g1331 724 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1331 Acco-ChrAcco05 28125919 28131324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1331 1 642 NAC Transcription Factor Family AT1G65910 43.606 2.39e-152 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco05g1331 NAM 4.5e-40 No_clan