Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1304 ATGGCTTGTGGGAATCAAACTTCAAGAGATAACACAACATTTGACTCAACAGTTCAACAAGTGCTAATCAATCTCAAAAGAGCAACACCCAGAATTACTGGTTTCTTTGCAGCCACAAAGGCTCAAGTACCTAACAAGGGTCCTACTATTTATGCCATGGCTCAATGTGTTGGTACTATCACACAGAGTGGCTGTCTTGATTGCTTGAACGTTGGCTACAACAATCTGAAGATTTGTCTTCCCACTTTGGAGGGTAGGGCTTTTGATGCTGGGTGCTTCATGAAATACTCCACCATTCCCTTCTTTCCAGATAACCAGACCATGGATATCATACCCTTCTTGAAACAAGTTTCAAGAAAGAGGGGAGCTATAGCTGGTGGGGTTGTAGGAGGTGTGGCTATTGGTTTGATTGTCCTTACAGTATTTCTTATGATTACACAATCCAAAAGGCCAAAGAAGGTTCTCATAGTGACAGGTGACATATTGGGAGCAACAGAGTTGAAAGGCCCTGTTAATTACAGGTATAAGGATTTGATGATTGCAACAAACAATTTTAGTGAAGGAAATAAACTGGGAGGAGGAGAATTTGGTGATGTCTACAAGGGCACTCTTAAAAATGGGAAAATTGTTGCAGTCAAGAAATTAGCTTTAGTCCACACAATAGAGGAAGATTTTGAAGGTGAAGTGAAGCTCATAAGTAATGTTCATCATCAGAATCTTGTTCGGCTTTTGGGATGTTGTAGTAAAGGCCAAGAGACGATCCTCGTTTATGAATACATGAAAAACAAGAGTCTTGACAAATTCTTATTCGATAAAAACAAAGGTTCTCTCAACTGGAAGCAACGAGGATACACAGCACCTGAGTATGCAATTCAAGGCTTATTATCTGAGAAGGTCGATACCTATAGTTATGGAGTTGTACTCCTAGAAATCATCAGCGGCCAAAAAAGCATTGAATTAAAGGTTGATCATGATGATGAAGGCGAATTCCTCCTTCAACAAGCATGGAAACTATATGAGAAAGACATGCACTTAAAGTTGGTGGATACTACCTTAGACCCTAATGAGTATGGTCCTGAAGAAATGAAGACAATCATAGAGATTGGTTTGCTTTGTACCCAAGCACGTCCTGCATTGAGGCCAACAATGTCTGAAGTTGTTCTTCTGCTTAGAAGCAAGGGCCTAGTGGAGCACATGAAACCCACGATGCCTGTCTTTATTGAAAATAATTTGAGAGCTAAGGAAGGCATCTTAGCCTCAGCTGCTTTCCTTAATTCCAACGCTACAGCCTCCACTATGACACTATCAGCAAGATGA 1317 0.407 MACGNQTSRDNTTFDSTVQQVLINLKRATPRITGFFAATKAQVPNKGPTIYAMAQCVGTITQSGCLDCLNVGYNNLKICLPTLEGRAFDAGCFMKYSTIPFFPDNQTMDIIPFLKQVSRKRGAIAGGVVGGVAIGLIVLTVFLMITQSKRPKKVLIVTGDILGATELKGPVNYRYKDLMIATNNFSEGNKLGGGEFGDVYKGTLKNGKIVAVKKLALVHTIEEDFEGEVKLISNVHHQNLVRLLGCCSKGQETILVYEYMKNKSLDKFLFDKNKGSLNWKQRGYTAPEYAIQGLLSEKVDTYSYGVVLLEIISGQKSIELKVDHDDEGEFLLQQAWKLYEKDMHLKLVDTTLDPNEYGPEEMKTIIEIGLLCTQARPALRPTMSEVVLLLRSKGLVEHMKPTMPVFIENNLRAKEGILASAAFLNSNATASTMTLSAR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1304 438 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 38 282 - -
Acco05g1304 438 Gene3D Phosphorylase Kinase; domain 1 158 259 - -
Acco05g1304 438 Gene3D - 1 101 IPR038408 -
Acco05g1304 438 Pfam Protein tyrosine and serine/threonine kinase 284 388 IPR001245 GO:0004672|GO:0006468
Acco05g1304 438 Pfam Protein tyrosine and serine/threonine kinase 188 281 IPR001245 GO:0004672|GO:0006468
Acco05g1304 438 FunFam Cysteine-rich receptor-like protein kinase 2 148 259 - -
Acco05g1304 438 SUPERFAMILY Protein kinase-like (PK-like) 175 402 IPR011009 -
Acco05g1304 438 ProSiteProfiles Gnk2-homologous domain profile. 1 101 IPR002902 -
Acco05g1304 438 Gene3D Transferase(Phosphotransferase) domain 1 280 401 - -
Acco05g1304 438 FunFam Cysteine-rich receptor-like protein kinase 2 1 101 - -
Acco05g1304 438 Pfam Salt stress response/antifungal 3 98 IPR002902 -
Acco05g1304 438 ProSitePatterns Protein kinases ATP-binding region signature. 191 214 IPR017441 GO:0005524
Acco05g1304 438 ProSiteProfiles Protein kinase domain profile. 185 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1304 Acco-ChrAcco05 27587309 27589950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1304 283 438 Receptor kinase-like Gene Family AT1G70520 34.783 7.54e-22 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1304 PK_Tyr_Ser-Thr 1.9e-06 CL0016