Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1299 ATGCTCTTGCTTGCACCTTCTGTTACTCTCCTTCTTCCCTTATTCACTACCTTCATATCCTTAAACTGCGTCGTTTCTGACCCCCAGATCTATCTCCTCAACACCGGCTGCTTCCAGTACAATAGGTTAGATCCAACAGATGCTAATTCCTTCAATCAAAGCCTAAACGCAGCGTTTAAAGATCTCTACGACCAGAACAAGCACTTCGCCAAGGCCCAGCAAGCCACCGGAGCCGTTGCCGTTTTCGCTCTTTTTCAGTGCAGAAGCTACCTCTCCGCCGCCGACTGTGCCAACTGCTTCTCCGCCGCTGCTGCTCAACTCCGTAATTGCTCCGCCGGCACCAACGCTGCCCGTGTCATCTACGACGGCTGCTTCCTCAGGTACGAGAGCAGCAATTTCTTTGACCAAGCAACAGGGTCTTTCAATTCTGCATCATGCGGAAATCAGAGAGCGGGAGGAAGCGCAGCATTATTTAACTCAATCATTCAACAAGTGCTAATGAATCTTCAAACAGAAACGCCCAGAATTACAGGTTTCTCTGCAGCCACAAAGACGCAAGTACCTAATAATAACAACACAACCATTTATGCCTATGCACAATGTACTGAAACTATCTCTCAAAGTGGGTGCGAGGATTGCTTGAAACAAGGCTACAACACTATACAGACTTGTCTTCCCAATTCAGATGGTAGGGCTTTTGATGCTGGGTGTTTCATGAGATACTCAACCACTTCCTTCTTTGCTGATAACCAGACCATCAATATCACACCCTTCTCCAAACAAGGTTCAAGTAACAAAAAAGGAGCAATTATTGGTGGAGTAGTTGGGGCTGTGGCTCTTGTTTTAGTGCTCTTTTCACTGTTTGCCTGGTGGATGCATGTTAGACGGTCAAAAAGGTCTAAAAGGGTTCCTAGAGGTGAGATAATGGGAGAATCCAAATTGAGAGCCCCACTTAATTACAATTATAAGGAATTGAAGTCTGCCACCAAGAATTTCAGTGAAAAGAATAAATTAGGAGAAGGAGGATTTGGTACTGTATACAAGGGAACCTTAAAAAATGGAAAAACAGTTGCAGTCAAGAAACTTGCTATGCGACAATCCAACAGAATGGACGTGGAATTTGAGAGTGAAGTGAGGCTAATAAGTAATGTTCATCATCGAAATCTTGTTCGTCTTCTAGGATGCTGCAGTAAAGGCAACAAGAGAATTCTCGTTTACGAATACATGAAAAACACCAGTCTTGATAGATTCTTATTCGGCAGCAATAAAGGTTCTCTCTGTTGGAAGCAACGATATGATATAATCTTAGGCGTGGCAAGGGGTTTGACCTATCTACATGAAGAATTTCACATTTGTATTATACATAGAGATATAAAGACTAACAACATTCTCCTTGATGATGATTTCCAACCTAAAATTGCTGATTTTGGGTTGGCAAGACTTTTACCTGGGGATCAAACTCATCTTAGCACTAGATTTGCAGGAACATTGGGATATACAGCACCAGAATATGCAATTCATGGCCAGTTATCAGAGAAAGCCGATACCTACAGCTATGGTGTTATAGTCTTAGAAATCATTAGTGGCCAGAAGAGTAGTGAACTAAAAGTTGATGCTCATGCTGATGGCGAATTCCTCCTTCAACAAGCATGGAAACTATATGAGAAGGGCATGCACTTGGGGTTGGTGGACAGTACCTTAGACCCTAATGAGTATGATTCAGAAGAAGTGAAGAAAATCATAGAGATTGGTCTGCTTTGCACACAATCGTCTCCTGCAATAAGACCAACAATGTCTGAAGTTGTTGTTTTGCTGCAAAGTAGTGAAGGCTTACCAAATAATGTGAGACCCACCAGGCCTCTCTATATTGATACCGATTCAATTTCATCAGGGTTCAATGGAGACACATCTACCTATACTGCTTCCAATTCCAATGCTACTATCTCCACTTCCATGGTATCAGCAAGATCATGA 1974 0.4271 MLLLAPSVTLLLPLFTTFISLNCVVSDPQIYLLNTGCFQYNRLDPTDANSFNQSLNAAFKDLYDQNKHFAKAQQATGAVAVFALFQCRSYLSAADCANCFSAAAAQLRNCSAGTNAARVIYDGCFLRYESSNFFDQATGSFNSASCGNQRAGGSAALFNSIIQQVLMNLQTETPRITGFSAATKTQVPNNNNTTIYAYAQCTETISQSGCEDCLKQGYNTIQTCLPNSDGRAFDAGCFMRYSTTSFFADNQTINITPFSKQGSSNKKGAIIGGVVGAVALVLVLFSLFAWWMHVRRSKRSKRVPRGEIMGESKLRAPLNYNYKELKSATKNFSEKNKLGEGGFGTVYKGTLKNGKTVAVKKLAMRQSNRMDVEFESEVRLISNVHHRNLVRLLGCCSKGNKRILVYEYMKNTSLDRFLFGSNKGSLCWKQRYDIILGVARGLTYLHEEFHICIIHRDIKTNNILLDDDFQPKIADFGLARLLPGDQTHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGVIVLEIISGQKSSELKVDAHADGEFLLQQAWKLYEKGMHLGLVDSTLDPNEYDSEEVKKIIEIGLLCTQSSPAIRPTMSEVVVLLQSSEGLPNNVRPTRPLYIDTDSISSGFNGDTSTYTASNSNATISTSMVSARS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1299 657 SUPERFAMILY Protein kinase-like (PK-like) 315 605 IPR011009 -
Acco05g1299 657 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
Acco05g1299 657 ProSiteProfiles Gnk2-homologous domain profile. 33 133 IPR002902 -
Acco05g1299 657 Pfam Salt stress response/antifungal 154 243 IPR002902 -
Acco05g1299 657 Pfam Salt stress response/antifungal 46 130 IPR002902 -
Acco05g1299 657 Gene3D - 34 133 IPR038408 -
Acco05g1299 657 Gene3D - 139 246 IPR038408 -
Acco05g1299 657 ProSiteProfiles Protein kinase domain profile. 332 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1299 657 CDD STKc_IRAK 338 606 - -
Acco05g1299 657 Pfam Protein kinase domain 332 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1299 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Acco05g1299 657 SMART serkin_6 332 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1299 657 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 83 636 - -
Acco05g1299 657 FunFam Cysteine-rich receptor-like protein kinase 2 141 246 - -
Acco05g1299 657 FunFam Cysteine-rich receptor-like protein kinase 2 296 408 - -
Acco05g1299 657 Gene3D Transferase(Phosphotransferase) domain 1 409 615 - -
Acco05g1299 657 Gene3D Phosphorylase Kinase; domain 1 306 408 - -
Acco05g1299 657 FunFam Cysteine-rich receptor-like protein kinase 2 409 613 - -
Acco05g1299 657 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1299 Acco-ChrAcco05 27492220 27503892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1299 65 656 Receptor kinase-like Gene Family AT1G70520 39.439 9.04e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1299 Pkinase 1.9e-50 CL0016