Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1298 ATGCCTCAACCTATTACTCTCCTTCGTCTTCCCTTGTTTATTACTACCTTCTTCATATTCTGGTCATGTTGCTCCCTTGACGGCGTCGTTTCCGACCCCCAGATCAATCTTCTAGGCCGTGCTTGCCTCCAATATAACAGAGATGAGTATGATACCAAGACTTTCAATGACAGCGTAAGCGCAACGTTTCGTGACCTCACATATCAGGTGGTTAACCAGAGCAGGATCTTCGCCACCGCGCAGCAGACCGACGGAGACCACCCGGTTTACGCTATTTTTCAGTGCAGAAGCTACCTCTCTGCCTCTGACTGTGTCGCTTGCTTCACCCTTGCTGCCGCAGAAATCCGCAACTGCTCCGCCGGGACTAACTTTGCTCGTGTGATCTACGACGGCTGCTTCCTCAGGTATGAGAGCACCAATATTCTTGAGCAGACAACTGGAATTTACAATACTGCATCGTGTGGAAATCAAAGTACTGTAGAAGCAGATACATCATTTTCTTCAGCTGCACAACAACTGCTAATGAATATTGAAACAACAACACCCAAAATCTCTGGTTTCTCTGCAGCCACAAAAGCTCAAAATGGTCCAACTATTATTTATGGCTATGCTCAATGTACTGAAACTATCTCACAGAGTGGGTGTGAGGATTGCTTGAAGCAAGGGGTCAACACTGTACGGACTTGTCTTCCTAATTCAGAGGGTAGGGCTTTTGACGCTGGTTGTTACATCAGATACTCCACAACTTCCTTCTTTCCTGATAACCAGACCATTTATATCCCTAATCCCTCAGTCAAACAAGCTGGTTTAAGCAAGAAGGGGGTCATTATTGGTATAATTGTTGAAGTGGTAGCTTTTGTTTTGGTCCTCCTTACTCTACTGGCTTATATCAGACGACCAAAAATGCATAAGAGAACTCTAAGAGGAGACATAACCGGAGCAAGCACTTTGAAGGGCCCAGTTAATTATAGTTACGGAGATTTAAAGTCAGCAACAAACAATTTCAGTATAGAAAATAAACTTGGAGAAGGAGGATTTGGTGTTGTATACAAGGGCACTTTGAAGAATGGAAAGGTTGTTGCGGTCAAGAAATTAAGTTTACGGTGCTACTCTGAGAGAGTGGAGGAAGAATTTGAGAGTGAAGTGAAGCTTATAAGCAAAAAGAAGGGTTCTCTAGGTTGGAAGCAACGATATGATATAATTTTAGGAATGGCAAGGGGTTTAGCTTATCTACATGAAGAATATCATGTTCGTATCATACATAGAGATATAAAGACTAACAACATCCTTTTAGATGATGATTTGCAACCTAAAATTTCTGATTTTGGCTTGGCAAGACTTTTACCTGAGGAGAAAACTCATCTTAGTACTAGAGTTGCCGGAACATTAGGATACACAGCTCCAGAGTATGTAATCCATGGTCATGTATCAGAAAAGGCTGATATCTATAGCTTTGGTGTGGTTGTCCTAGAGATCATCAGTGGTGAACGAAGTAATGAATTAAAAGTTGATGGTGACGACGAAGGTGAATTCCTCCTTAGAAAGGCTTGGAAACTATATGAAAGAGCCATCCACGTGGAGCTGGTCGACAAAACCTTAAACCCTAATGTTTATGATGCAGAGGAAGTGAAAAAGATAATAGAAATCGGTTTGCTTTGCACCCAAGCAAATACTGAATTAAGGCCAACAATGTCTGAAGTAGTTGTTTTGCTCCAAGAGAAGGGCTTATCAAAGAACATAAAACCCACAATGCCTATTTTGATTGAAGCTGATTAA 1776 0.4189 MPQPITLLRLPLFITTFFIFWSCCSLDGVVSDPQINLLGRACLQYNRDEYDTKTFNDSVSATFRDLTYQVVNQSRIFATAQQTDGDHPVYAIFQCRSYLSASDCVACFTLAAAEIRNCSAGTNFARVIYDGCFLRYESTNILEQTTGIYNTASCGNQSTVEADTSFSSAAQQLLMNIETTTPKISGFSAATKAQNGPTIIYGYAQCTETISQSGCEDCLKQGVNTVRTCLPNSEGRAFDAGCYIRYSTTSFFPDNQTIYIPNPSVKQAGLSKKGVIIGIIVEVVAFVLVLLTLLAYIRRPKMHKRTLRGDITGASTLKGPVNYSYGDLKSATNNFSIENKLGEGGFGVVYKGTLKNGKVVAVKKLSLRCYSERVEEEFESEVKLISKKKGSLGWKQRYDIILGMARGLAYLHEEYHVRIIHRDIKTNNILLDDDLQPKISDFGLARLLPEEKTHLSTRVAGTLGYTAPEYVIHGHVSEKADIYSFGVVVLEIISGERSNELKVDGDDEGEFLLRKAWKLYERAIHVELVDKTLNPNVYDAEEVKKIIEIGLLCTQANTELRPTMSEVVVLLQEKGLSKNIKPTMPILIEAD 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1298 591 FunFam Cysteine-rich receptor-like protein kinase 2 149 251 - -
Acco05g1298 591 SMART serkin_6 335 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1298 591 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 391 586 - -
Acco05g1298 591 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Acco05g1298 591 ProSiteProfiles Gnk2-homologous domain profile. 37 141 IPR002902 -
Acco05g1298 591 ProSiteProfiles Protein kinase domain profile. 335 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1298 591 SUPERFAMILY Protein kinase-like (PK-like) 316 571 IPR011009 -
Acco05g1298 591 Gene3D - 40 140 IPR038408 -
Acco05g1298 591 Gene3D - 147 251 IPR038408 -
Acco05g1298 591 Pfam Salt stress response/antifungal 48 138 IPR002902 -
Acco05g1298 591 Pfam Salt stress response/antifungal 154 248 IPR002902 -
Acco05g1298 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Acco05g1298 591 Gene3D Phosphorylase Kinase; domain 1 300 386 - -
Acco05g1298 591 ProSiteProfiles Gnk2-homologous domain profile. 148 251 IPR002902 -
Acco05g1298 591 Pfam Protein kinase domain 388 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1298 591 Gene3D Transferase(Phosphotransferase) domain 1 387 582 - -
Acco05g1298 591 FunFam Cysteine-rich receptor-like protein kinase 2 378 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1298 Acco-ChrAcco05 27410132 27414748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1298 3 574 Receptor kinase-like Gene Family AT1G70520 33.492 2.57e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1298 Pkinase 3.8e-28 CL0016