Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1296 ATGCTTCAACCTACTACTCTCCTTCTTCCCTTGTTTACTACCTTCATATTCTGGTCATGCTCATCCTTTGACAGTGTCGTTTCCGACCCTCAGACCAATAATCTATGTCATGCCTGCCTCAAATCTAACGGAGATGAATATGATACTAAGTCCTTCAATGACAGCCTAAGCGCAACGTTTCGAGACCTCACGTATCAGGTGGTGAATCAGAGCAAGTTCTTTGCCACGGCGCAGCAGACCGATGGAAGCCTCCCCGTTTACGCTATTTTTCAGTACGAGAGTACCAATATTCTTGAGCAGACAGATGGAATTTACAATGGTGCACCTTGTGGGAATCAAAGTGCAGAAGCAGCTACTGCTTTTTCTTCAGCTGCACAAAGACTCCTAACGAATCTTCAAACAACAACACCTAGAATCACTGGTTTCTATGCAGCCACAAAACTTCAAGTTCCTAATAATAATAATAATAATGGTGAAACCATCTATGGCTATGCTCAATGTACTGAAACTATCTCACAGAGTGGGTGTGAGGATTGCTTGAAGCAAGGGGTCAACTCTCTGCAGCCTTGTCTTCCCAATACAGAGGGTAGGGTGTTTGATGCTGGCTGTTTCATGAGATACTCCACAACTTCCTTTTTTCCTGACAACCATATCATCAATATCACTAGTCTCTCTGTCAAACAAGGTGGTTCAAGCAAGAAGGGGGTGATTATTGGTGTAATTGTTGGAGGGGTGGCTTTTGTTTTGATCCTCCTTACTCTACTGGCTTATATCAGACAACCAAAAAGGCATGAGAGAGTTCCTACAGCCACAGGTGACATAACTGGAGCAAGCAATTTGAAGGGCCCAGTTAATTTTAATTATGGGGATTTAAAGTATGCAACACAAAATTTCAGTGCACAAAATAAACTTGGAGAAGGAGGATTTGGTATTGTATATAAGGAACATTGTAAAGGATATACAGCTCCGGAATATGCAATTCATGGTCAATTATCAGAAAAAGCTGATATCTATAGCTTTGGTGTTGTTCTCCTAGAGATCATTAGTGGTCAGAGGAGCAATGAATTAAAAGTTGATGGTGACGTTGAAGGCGAATTCCTCCTTCGGAAGGCTTGGAAACTATATGAAAGAGGCATCCACGTGGAGCTGGTCGACGAAACCTTAAACCCTAATGATTATGATGCAGAGGAAGTGAAAAACACAATAGAAATCGGTTTCCTTTGCACCCAAGCACCTGCTGAATTAAGGCCACCAATTTCTGAAGTAGTTGTTTTGCTCCAAAACAAGGGCTTATCAAAGAACACAAAACCCACAATGCCTATTTTGATTGAAGTTAATTAA 1341 0.4154 MLQPTTLLLPLFTTFIFWSCSSFDSVVSDPQTNNLCHACLKSNGDEYDTKSFNDSLSATFRDLTYQVVNQSKFFATAQQTDGSLPVYAIFQYESTNILEQTDGIYNGAPCGNQSAEAATAFSSAAQRLLTNLQTTTPRITGFYAATKLQVPNNNNNNGETIYGYAQCTETISQSGCEDCLKQGVNSLQPCLPNTEGRVFDAGCFMRYSTTSFFPDNHIINITSLSVKQGGSSKKGVIIGVIVGGVAFVLILLTLLAYIRQPKRHERVPTATGDITGASNLKGPVNFNYGDLKYATQNFSAQNKLGEGGFGIVYKEHCKGYTAPEYAIHGQLSEKADIYSFGVVLLEIISGQRSNELKVDGDVEGEFLLRKAWKLYERGIHVELVDETLNPNDYDAEEVKNTIEIGFLCTQAPAELRPPISEVVVLLQNKGLSKNTKPTMPILIEVN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1296 446 SUPERFAMILY Protein kinase-like (PK-like) 276 318 IPR011009 -
Acco05g1296 446 Gene3D Transferase(Phosphotransferase) domain 1 295 439 - -
Acco05g1296 446 FunFam Cysteine-rich receptor-like protein kinase 2 105 212 - -
Acco05g1296 446 Pfam Salt stress response/antifungal 113 209 IPR002902 -
Acco05g1296 446 Pfam Protein tyrosine and serine/threonine kinase 320 353 IPR001245 GO:0004672|GO:0006468
Acco05g1296 446 Gene3D - 105 212 IPR038408 -
Acco05g1296 446 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 92 315 - -
Acco05g1296 446 ProSiteProfiles Gnk2-homologous domain profile. 103 212 IPR002902 -
Acco05g1296 446 SUPERFAMILY Protein kinase-like (PK-like) 319 426 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1296 Acco-ChrAcco05 27334337 27338798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1296 91 314 Receptor kinase-like Gene Family AT1G70530 35.371 2.82e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1296 PK_Tyr_Ser-Thr 2.1e-05 CL0016