Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco05g1294 | ATGTTGCTGCTGCATCTGCAACAGAAGCCCCACTTTGTCTTATTCTTCTTAGGATTGATAATCTGGTCATGGGGGACTCTTGACGTTGTCGTTTCGGATCCACAGACCAACTTTGTGAAACTAGGGTGCAGTCAGTACAACGTGAGTGATTTGTCCATTTTCAGTGACAACTTAAACATAACACTGAGAGATCTGAGAGCACAGATCAGCAACAAAAGCAATCACTTTGCCACGGCCCAGGCAGTGAAGGGTAACAATCCGGCGTACGGCCTTTTTCAGTGCAGAAACTACCTCTCCATTAGTGACTGCCTCACTTGCTTCGACTACGCGGCCATTCACATAAGGAACTGCTCCGTCGGGGTCACCGGTGCCCGTATCATCTATGAAGGTTGCTTCCTCAGGTATGAGAGTAGTGGATTCTTCGATCAGAACACTGACGCTGGAAACAACATAATCTGTGGAAATCAGACTATCAGAAACACCACGGGACTTGCTTCAACTGTGCAACAAGTTATAACGAATCTGGACAAAGCAACCCCCAGAATCACTGGTTTCTATGCAGCCACTAAAACGCCAGTTCCTAATAGCAATGGCACAAACATTTATGCAATCGCTCAATGTATTGAGACTATCACACAAGTTGGGTGCCAGGATTGCCTCAATATTGCCTTAAGAAATTTTCAGATTTGTCTTCCCAACTCAAATGCTGAGACTTATGATGCTGGTTGCTTTATGAGATACTCCACCACAGCATTCTTTTCTGATAATCAAACCATTAATATTTGGCCCTTCTTGAATCAAGGGGGAAGTTCAAGCAAGAAGAAGGCGATTATTGGGGGAGTGGTTGGTGGTGGATCTTTTCTTTTGATTCTCCTTGCATTATATGCTTGGTACATACGATCGACATCGTCCAAGAGGATTCATAGAGGTGATATTTTAGGAGCAACTGACTTGAAAGGCCCAATTACTTATAGGTACAAAGATCTTAAGAAAGCTACAAAAAATTTCAGCAAAGAAAATAAATTAGGAGAAGGAGGCTTCGGCGATGTATACAAGGGCACTCTGAAAAATGGGAAAGTAGTTGCGGTAAAGAAATTGGCTCTAGGGCAATCCAAACAGATGGAGAAAGATTTTGAGAGCGAAGTGAAGTTGATAAGTAACATTCATCATCGGAATCTTGTTCGACTTCTTGGATGTTGCAGTAAAGGGCAAGATAGGCTCCTTGTTTATGAATACATGAAAAACAACAATGTTGGCACATTCTTATTTGGCAAAAATAAAGGCTCCCTCAGCTGGAAGCAACGTTATAATATAATTTTAGGCACAGCAAAGGGTTTGGCTTATTTACATGAGGAATTCCATGTTTGTATCATACATAGAGATATAAAGACCACTAACATTCTCTTGGATGATGATCTACAACCTAAAATTGCTGATTTTGGGTTGGCAAGGCTTCTCCCACATGACTTATCTCATTTAAACACAAAATTTGCAGGAACAATGGGATACACTGCACCTGAATATGCAATGCATGGACAATTATCAGAGAAAGCCGATACCTATAGTTATGGTGTTGTAGTCCTGGAAATCATAAGTGGACACAAGACTGGTGAAACAGGGGATGACGTTGAAGGCGAATTTCTCCTTCAAAGAGCTTGGAAACTCTTTGATAGAGGCGTACACTTAGATTTTGTGGACAAAACCTTAGACCCTAAGGAGTATGATGCAGAGGAAGTGAAGAAAATCATAGAGATTGCTTTGCTTTGTACTCAAGCATCTCCTGCAGCGAGGCCTACAATGTCTGAAATTGTAATTATGCTCAAAGGCAAGGGCTTTATGGAGAACAGGAGACCCACTATGCCTGTCTATGTGGATCCCAATTTTAATCCCAGAAGAGACTCTTCAACCTCTCATAACCCATCTTCATCAAATGCTACTGCCTCCACTGTTGCTCTATCTGGAAGATGA | 1968 | 0.4192 | MLLLHLQQKPHFVLFFLGLIIWSWGTLDVVVSDPQTNFVKLGCSQYNVSDLSIFSDNLNITLRDLRAQISNKSNHFATAQAVKGNNPAYGLFQCRNYLSISDCLTCFDYAAIHIRNCSVGVTGARIIYEGCFLRYESSGFFDQNTDAGNNIICGNQTIRNTTGLASTVQQVITNLDKATPRITGFYAATKTPVPNSNGTNIYAIAQCIETITQVGCQDCLNIALRNFQICLPNSNAETYDAGCFMRYSTTAFFSDNQTINIWPFLNQGGSSSKKKAIIGGVVGGGSFLLILLALYAWYIRSTSSKRIHRGDILGATDLKGPITYRYKDLKKATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNIHHRNLVRLLGCCSKGQDRLLVYEYMKNNNVGTFLFGKNKGSLSWKQRYNIILGTAKGLAYLHEEFHVCIIHRDIKTTNILLDDDLQPKIADFGLARLLPHDLSHLNTKFAGTMGYTAPEYAMHGQLSEKADTYSYGVVVLEIISGHKTGETGDDVEGEFLLQRAWKLFDRGVHLDFVDKTLDPKEYDAEEVKKIIEIALLCTQASPAARPTMSEIVIMLKGKGFMENRRPTMPVYVDPNFNPRRDSSTSHNPSSSNATASTVALSGR | 655 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco05g1294 | 655 | Gene3D | - | 148 | 252 | IPR038408 | - | |
| Acco05g1294 | 655 | Gene3D | - | 35 | 140 | IPR038408 | - | |
| Acco05g1294 | 655 | ProSiteProfiles | Gnk2-homologous domain profile. | 146 | 252 | IPR002902 | - | |
| Acco05g1294 | 655 | SUPERFAMILY | Protein kinase-like (PK-like) | 321 | 631 | IPR011009 | - | |
| Acco05g1294 | 655 | MobiDBLite | consensus disorder prediction | 629 | 655 | - | - | |
| Acco05g1294 | 655 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 303 | 412 | - | - | |
| Acco05g1294 | 655 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 90 | 641 | - | - | |
| Acco05g1294 | 655 | CDD | STKc_IRAK | 342 | 609 | - | - | |
| Acco05g1294 | 655 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 35 | 140 | - | - | |
| Acco05g1294 | 655 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 457 | 469 | IPR008271 | GO:0004672|GO:0006468 | |
| Acco05g1294 | 655 | Pfam | Protein tyrosine and serine/threonine kinase | 338 | 605 | IPR001245 | GO:0004672|GO:0006468 | |
| Acco05g1294 | 655 | MobiDBLite | consensus disorder prediction | 623 | 655 | - | - | |
| Acco05g1294 | 655 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 148 | 252 | - | - | |
| Acco05g1294 | 655 | ProSiteProfiles | Protein kinase domain profile. | 336 | 613 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco05g1294 | 655 | Gene3D | Transferase(Phosphotransferase) domain 1 | 413 | 618 | - | - | |
| Acco05g1294 | 655 | Pfam | Salt stress response/antifungal | 160 | 249 | IPR002902 | - | |
| Acco05g1294 | 655 | Pfam | Salt stress response/antifungal | 46 | 137 | IPR002902 | - | |
| Acco05g1294 | 655 | Gene3D | Phosphorylase Kinase; domain 1 | 301 | 412 | - | - | |
| Acco05g1294 | 655 | ProSitePatterns | Protein kinases ATP-binding region signature. | 342 | 365 | IPR017441 | GO:0005524 | |
| Acco05g1294 | 655 | ProSiteProfiles | Gnk2-homologous domain profile. | 36 | 140 | IPR002902 | - | |
| Acco05g1294 | 655 | SMART | serkin_6 | 336 | 607 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Acco05g1294 | 655 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 413 | 615 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco05g1294 | Acco-ChrAcco05 | 27243176 | 27249547 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco05g1294 | 14 | 655 | Receptor kinase-like Gene Family | AT1G70520 | 36.489 | 8.96e-125 | 382 |
Transcription factors information