LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco05g1291	ATGTTTCAACCTCCTGATAATAATCTCCTTCCATTATTTACCTTCGTATTCTGGTTATGCTGGACTCTTAACGGTGTGGTTTCGGATCCACAGACCAATCTTCTTAAGATCCGCTGCAACCCATACGATGGCGTGGTTACGAACTCCTCCTTGGTCGAAGAAAACCTAAACGTAACATTCCAAGATATCAGACAGCAAATCAGTGATCAAAACAAGCACTTCGCAACCGCGGCGAAAGAGGCCAATGGAGCACCGGTTTACACTATTTTTCAGTGCAGAAAGTATATGTCCGTCGCTGACTGTATCAAGTGCTTCGATGCGGCCGCCAACCAAATCCGCAGCTGCACCGCCTCCAAGTCCTCCGCTGCCCTTGCCGTGTACGATGGTTGCTTCATCAGGTACAACTCCAATGGTGTCTTTGACGAGGCACCGCAGCCTTTCAACATCGTATCATGTGGAAATCAAACTACAGGAGAAGCAGCAACTATATTTAACACGACAGTGCAACAAGTGCTAATGAATCTCCAAACAGCAACACCCAGAATCCCAAGTTTATCTGCGGCCACGAAGATTCTTGTCCCAAACAATAATAATAATAATAATGGTGCGATGACTATTTATGCTTATGCTCAATGTGTTGAAACTGCCACAATGAAGGTGTGCCTTGATTGCTTGAAGGTTGATTACAGTAGCGTGGAGATTTGTTTTCCCAATTCGGATGGTACGGCTTTTGATTATAGTTGTTTCATGAGATACTCCACCACTCCCTTTTTTCCTGATAACCAGACCATTGATATCACAATACCCTCCGCCAAACAACAAGGTTCATCAAGCAAAAAGGGGGCCGTTATTGGTGGAGTAGTTGGTGGGATAGCTCTTGTTTTGATAGTCCTTGGTTTGTTGTTTGCCTGGATTAGACGACACAAAAAGAATGAGAGAAGTCCCAGAGAAGACATAATGGGAGCAAGCAAATTGAAAGGCCCAATTACTTACCGTTATGATGATTTGATGTCGGCAACCAACAATTATAGTGAAGAAAATAAAGTAGGAGAGGGAGGATTCGGGGCTGTATACAAGGGCACTTTGAAGAATGGGAAAGTTGTTGCAGTCAAGAAAATGACGTTAAGAGATTCCGACAGGGTCGATGAAGATTTTGAAAGTGAAGTGACGCTTATTAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTGGGATGTTGTTCTAAAGGCCCTGACAGAATCCTTGTTTATGAATACATGAAAAATAGCGGCCTTGACAACTTCTTATTTGGCGAAGAAAGAAAAGATTTTGGGCTGGCAAGGCTCTTTCCCGACCATAAATCCCATATTAGAACAAGAATTGTTGGAACATTGGGATACACAGCACCAGAGTATGCAATTCATGGCAAATTATCAGAAAAAGCTGATATTTACAGTTATGGTGTTGTTGTCTTAGAAATCATTAGTAGTCAGAAGTGCACAGAATTAAGGCTTGACGGTGATGATGCAGGGGCATTCCTCATTCAAAAAGCATGGAAACTCTATGAAAATGAAAACCACTTGGAGTTAGTGGATAGGGCCTTAGACCCTAATGAGTATGATGCAGAAGAAGTGAAGAAAACGGTAGAGATTGGTTTGCTTTGCATCCAAGCATCTGCGGATGCAAGGCCAATGATGTCTGAAGTAGTTGCTATGCTTCAAAACAAGGATTTATTAGAGAACTTGAGACCCTCCATGCCTATCTTGATTGATATTAATTAG	1761	0.4231	MFQPPDNNLLPLFTFVFWLCWTLNGVVSDPQTNLLKIRCNPYDGVVTNSSLVEENLNVTFQDIRQQISDQNKHFATAAKEANGAPVYTIFQCRKYMSVADCIKCFDAAANQIRSCTASKSSAALAVYDGCFIRYNSNGVFDEAPQPFNIVSCGNQTTGEAATIFNTTVQQVLMNLQTATPRIPSLSAATKILVPNNNNNNNGAMTIYAYAQCVETATMKVCLDCLKVDYSSVEICFPNSDGTAFDYSCFMRYSTTPFFPDNQTIDITIPSAKQQGSSSKKGAVIGGVVGGIALVLIVLGLLFAWIRRHKKNERSPREDIMGASKLKGPITYRYDDLMSATNNYSEENKVGEGGFGAVYKGTLKNGKVVAVKKMTLRDSDRVDEDFESEVTLISNVHHRNLVRLLGCCSKGPDRILVYEYMKNSGLDNFLFGEERKDFGLARLFPDHKSHIRTRIVGTLGYTAPEYAIHGKLSEKADIYSYGVVVLEIISSQKCTELRLDGDDAGAFLIQKAWKLYENENHLELVDRALDPNEYDAEEVKKTVEIGLLCIQASADARPMMSEVVAMLQNKDLLENLRPSMPILIDIN	586

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco05g1291	586	ProSiteProfiles	Gnk2-homologous domain profile.	146	257	IPR002902	-
	Acco05g1291	586	SUPERFAMILY	Protein kinase-like (PK-like)	327	573	IPR011009	-
	Acco05g1291	586	Gene3D	Phosphorylase Kinase; domain 1	304	419	-	-
	Acco05g1291	586	FunFam	Cysteine-rich receptor-like protein kinase 2	307	419	-	-
	Acco05g1291	586	ProSiteProfiles	Gnk2-homologous domain profile.	34	139	IPR002902	-
	Acco05g1291	586	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	88	432	-	-
	Acco05g1291	586	Gene3D	-	31	138	IPR038408	-
	Acco05g1291	586	Gene3D	-	147	257	IPR038408	-
	Acco05g1291	586	Gene3D	Transferase(Phosphotransferase) domain 1	424	578	-	-
	Acco05g1291	586	ProSiteProfiles	Protein kinase domain profile.	343	586	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco05g1291	586	ProSitePatterns	Protein kinases ATP-binding region signature.	349	372	IPR017441	GO:0005524
	Acco05g1291	586	Pfam	Protein tyrosine and serine/threonine kinase	436	566	IPR001245	GO:0004672\|GO:0006468
	Acco05g1291	586	Pfam	Protein tyrosine and serine/threonine kinase	346	430	IPR001245	GO:0004672\|GO:0006468
	Acco05g1291	586	Pfam	Salt stress response/antifungal	47	136	IPR002902	-
	Acco05g1291	586	Pfam	Salt stress response/antifungal	152	254	IPR002902	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco05g1291	Acco-ChrAcco05	27094516	27098802	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco05g1291	8	584	Receptor kinase-like Gene Family	AT1G70520	29.827	2.76e-80	263

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Acco05g1291		PK_Tyr_Ser-Thr	4.8e-10	CL0016