Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1283 ATGCTTCAACGTACTAATCTCCGTCTCTTATTTGCCTTCTTCATATTCTGCTCATTCTGGACCCTCAACGTCGTCTTTTCAGACCCACAGACCCATCTTGTGAGCAGATTCTGCAACCCATACGACGGACTGCAAGTGTCCAACATCTCCATGTTCGATGAAAACCGAAACGCCACGTTTCGAGACATCAGAAATCAGATTAGTGGTCAAAACAGGTACTTTGCCACTGCACAGCAAGCCAATGGAGGAAACCCTGCTGCCACTCTTTTTCAATGCAGAAACTATCTCTCCATCGCCGACTGTGTCTCCTGCTTCGACTCGGCTGCCGTGAAAATTCACAGCATTTGCCCCGCTGAATCCCCCAGTGGTTTTGTCGTCTACGACGGCTGCTTCCTCAGGTATGATGCCAGCAACTCTTTCTTTCTTGAGACAACGCCGTCAATTAACAGCGTAGCATGTGGAAACCAGACTGTTGACGGAGAAGCCACCGCGTTTGACTCAACAGCACAACAAGTGCTAACGAATCTTCAAACTACAACACCCACAACCACTGGTTTCTTTACAGCCACAAAGATGCAAGTCCCTAATAATAATAATCAAACTATTTATGCTTTTGCTCAATGTATTGGAACTATCACTCAGAATCTGTGCCTCAGTTGCTTGAACGCTGCGTATAGCAACTTGCAGACTTGTTTTCCCAATTCTAATGGTAGGGCTTATGCTAATGCCTGCTTCATGAGATACTCCACCACTTCCTTCTTTCCTCCTAACCAGACCTTTCATATTCTTCAACCCTTGATCAAACAAGGTTCAAATAATAAGGGGGCCACTATAGGTGTAGTTGTTGGAGGTGTAGCTTTTGTTTTGGTCCTCCTTGCACTTTTAGCTTGGATTAAACTACCAAAAAGGCATGAAAGACCAGTTCCTAGAGGAGACATATCTGGAGTAAGTAAGTTGAAAGGACCAATTATTTTTAGTTATAGAGAGTTGAAGATTGCTACCAAAAGTTTCAGCGAAGAAAATAAACTTGGAGAAGGCGGATTTGGTGCTGTATATAAGGGTACTTTGAAGAATGGGAAAGTAGTTGCTGTAAAGAAATTAACTTTACGCCACTCTAAGAAGGTGGATGAAGAATTTGAAAGTGAAGTGAAGCTTATAAGCAATGTTCATCATCGGAATCTTATTCGGCTTCTTGGATGTTGCAGTAAAGGCGATGAGAGAATTCTTATTTATGAATATATGAAAAACACCAGTCTTGATAAATTCTTATTCGGTAAAAATAGAGGTTCTCTCAATTGGAAACAACGATATGACATACTTTTAGGAACAGCAAGGGGTTTGGCTTATCTACATGAAGAATTTCATGTATGTATCATACATAGAGATATAAAGACTAACAATATTCTCTTAGATGATGATCTCCAACCAAGAATTGCTGATTTTGGTTTAGCAAGATTTTTACCTGATGAAAAATCTCATCTCAGTACAAAATTTGCTGGAACATTAGGATACACGGCACCAGAATATGCAATTCACGGTCAATTATCAGAAAAAGCTGATATTTATAGCTATGGTGTTGTTGTCCTTGAAATTATCAGTGGCCAACAAAGTAGTAAATTGAATATGCATGGTGATGGAGAAGGCGCATTCCTCCTTCAAACAGCTTGGAAACTATATGAGAAAAGCTCGCACATAGAGTTGGTGGACGATACCTTGGACCCTAATCAGTATAATACAGAAGAAGTGAAGAGAATCATAGAGATTGGTCTGCTTTGCACCCAAGCATCTGCTGAATTAAGGCCATCAATGTCTGAAGTAATTGTTTTGCTCCAAGGCAATGGCTTATTGGAGAATATGAGACCCACCATGCCTATCTTGATTGAAACAAATTAG 1893 0.4068 MLQRTNLRLLFAFFIFCSFWTLNVVFSDPQTHLVSRFCNPYDGLQVSNISMFDENRNATFRDIRNQISGQNRYFATAQQANGGNPAATLFQCRNYLSIADCVSCFDSAAVKIHSICPAESPSGFVVYDGCFLRYDASNSFFLETTPSINSVACGNQTVDGEATAFDSTAQQVLTNLQTTTPTTTGFFTATKMQVPNNNNQTIYAFAQCIGTITQNLCLSCLNAAYSNLQTCFPNSNGRAYANACFMRYSTTSFFPPNQTFHILQPLIKQGSNNKGATIGVVVGGVAFVLVLLALLAWIKLPKRHERPVPRGDISGVSKLKGPIIFSYRELKIATKSFSEENKLGEGGFGAVYKGTLKNGKVVAVKKLTLRHSKKVDEEFESEVKLISNVHHRNLIRLLGCCSKGDERILIYEYMKNTSLDKFLFGKNRGSLNWKQRYDILLGTARGLAYLHEEFHVCIIHRDIKTNNILLDDDLQPRIADFGLARFLPDEKSHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEIISGQQSSKLNMHGDGEGAFLLQTAWKLYEKSSHIELVDDTLDPNQYNTEEVKRIIEIGLLCTQASAELRPSMSEVIVLLQGNGLLENMRPTMPILIETN 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1283 630 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Acco05g1283 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Acco05g1283 630 CDD STKc_IRAK 343 612 - -
Acco05g1283 630 ProSitePatterns Protein kinases ATP-binding region signature. 343 366 IPR017441 GO:0005524
Acco05g1283 630 Pfam Salt stress response/antifungal 47 135 IPR002902 -
Acco05g1283 630 Pfam Salt stress response/antifungal 160 250 IPR002902 -
Acco05g1283 630 FunFam Cysteine-rich receptor-like protein kinase 2 148 253 - -
Acco05g1283 630 ProSiteProfiles Gnk2-homologous domain profile. 33 139 IPR002902 -
Acco05g1283 630 SUPERFAMILY Protein kinase-like (PK-like) 318 610 IPR011009 -
Acco05g1283 630 ProSiteProfiles Protein kinase domain profile. 337 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1283 630 Gene3D - 31 139 IPR038408 -
Acco05g1283 630 Gene3D - 147 253 IPR038408 -
Acco05g1283 630 Pfam Protein tyrosine and serine/threonine kinase 340 608 IPR001245 GO:0004672|GO:0006468
Acco05g1283 630 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 628 - -
Acco05g1283 630 Gene3D Phosphorylase Kinase; domain 1 314 413 - -
Acco05g1283 630 Gene3D Transferase(Phosphotransferase) domain 1 414 618 - -
Acco05g1283 630 SMART serkin_6 337 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1283 630 FunFam Cysteine-rich receptor-like protein kinase 2 414 618 - -
Acco05g1283 630 FunFam Cysteine-rich receptor-like protein kinase 2 303 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1283 Acco-ChrAcco05 26690022 26694702 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1283 21 611 Receptor kinase-like Gene Family AT1G70520 37.811 1.45e-119 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1283 PK_Tyr_Ser-Thr 1.3e-50 CL0016