Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1280 ATGCTTCAACCTGCTCATCATCTTCTTCCCTTATTTACCTTCATATTCTGCTCATGCTGGGTCCTCAACCGTGTCGTTTCAGACCCCCAGATCTATTTTTTGACCAGAGGGTGTAACCCATACTATGAATTCCTTGTGTCCAACGTCACCCTCTTCGATGAAAGCATAAACTCAACGTTGCACGACATCAGAGAGCAGATCAGTGGGCAAAACAAGCACTTCGCCACCGCACAGGAAGCTTCCAGTGGTGGAAACACCGTCTCCACACTTTTTCAATGCAGAAGTTACCTCTCAACCGCCGATTGTGTTGCCTGCTTTGACGTTGCTGCGACTCAAATTCTCAGCTGTGCTCCCGGCGACCCTGGCGGCCATGTTGTCTATGATGGATGCTACCTCAGGTACGACATTAGTAGAGCTTTCTTTGGTGATACAACACAGTCTGTCAATAGTGCATCATGCGGGAATCAGACTACAGATCAACCCGCTCCTGTAATTACCTTAGCTGTTCAACAAGTGCTAATGAATCTTCAAACAGCAACACCCATCACTGGCTTCTCTGCAGCCACAAAGACACAAGTGCCTAATAATGGTCCCAATATTTATGGATTTGCTCAATGTATTGAAACTATCTCACAAAGTGACTGCAAGGATTGCTTGAATGCTTCGTACAATAATTTGCAGACTTGCCTTCCCAATTCAGATGGTAGGGCTTATGCTAATGGCTGTTTCTTGAGATATTCCACCACTTCCTTCTTTCCTGAAAATCAGACCATTGATATCACACCATCCTTCAAGCAAGGTTCAAGCAATAAGGGACCCATTATAGGTGGAATTATTGGAGGCGTAGTAGCTCTTGCTTTGACATTCCTTGCATTATTTGTCTGGATTAGACGACAGAAAAGGCCTACGAGGGCTCCTAGAGAAGACATAATTGGAGCAAGCAAGTTGAAAGGTCCAGATATTTATGATTATAATGACTTGAAGGCTGCAACCAAGAATTTCAGTGAAGAAAATAAACTAGGAGAAGGGGGATTTGGTGTTGTATACAAGGGCACTTTGAAGACTGGAAAAGAGATTGCAGTCAAGAAATTAACATTTCGCCATTTCAATAGGATGGAGGAGGACTTTGAAAATGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTAGGCTCATGGGATATTGTATTCATGGCAAGAATAGAATCCTTGTTTATGAATACATGAGAAACAGCAGTCTTGATGTGTTCTTATTCGGTAAAATGAAAGGGTCACTCAACTGGAAGCAAAGATATGATATAATTTTAGGCATGGCAAGGGGACTAGCCTATTTGCATGAAGAATTCCACGTTTGCATCATACATAGAGATATAAAGCCTAACAATGTTCTCTTGGATGAAGATCTTCAGCCTAAAATTGCTGATTTTGGATTGGCAAGACTTCTACCTAAGGACAAAACTCATCTTAGCACCAAATTTGCAGGAACATTAGGATACACATCACCAGAATATATATTCCATGGCCAATTATCTGAGAAGACTGATGTTTATAGTTATGGTGTTGTAATCTTGGAGATTGTCGGTGGCCAAAGAAGTAAGGAACTTAGAGTCGATGGTGACATCGAAGGCGAATTCCTCCTTCAGAAAGCTTGGAAGCTATATGAAAAAGGTATGCATGCGGAGCTAGTGGACGAAACCTTAGACCCTAGTGATTATGATATGGAAGAAGTGAAGAAAGTCATAGAGGTTGGTTTGCTTTGCACCCAAGCATCCGCTGAAATAAGGCCAACAATGTCTGAACTAATTATTTTGCTCCAAAACAAGGACTTGTTAGAGAATAGCAAACCCACCATGCCTGTCTTGATTGAACCAAATTAG 1884 0.4177 MLQPAHHLLPLFTFIFCSCWVLNRVVSDPQIYFLTRGCNPYYEFLVSNVTLFDESINSTLHDIREQISGQNKHFATAQEASSGGNTVSTLFQCRSYLSTADCVACFDVAATQILSCAPGDPGGHVVYDGCYLRYDISRAFFGDTTQSVNSASCGNQTTDQPAPVITLAVQQVLMNLQTATPITGFSAATKTQVPNNGPNIYGFAQCIETISQSDCKDCLNASYNNLQTCLPNSDGRAYANGCFLRYSTTSFFPENQTIDITPSFKQGSSNKGPIIGGIIGGVVALALTFLALFVWIRRQKRPTRAPREDIIGASKLKGPDIYDYNDLKAATKNFSEENKLGEGGFGVVYKGTLKTGKEIAVKKLTFRHFNRMEEDFENEVKLISNVHHRNLVRLMGYCIHGKNRILVYEYMRNSSLDVFLFGKMKGSLNWKQRYDIILGMARGLAYLHEEFHVCIIHRDIKPNNVLLDEDLQPKIADFGLARLLPKDKTHLSTKFAGTLGYTSPEYIFHGQLSEKTDVYSYGVVILEIVGGQRSKELRVDGDIEGEFLLQKAWKLYEKGMHAELVDETLDPSDYDMEEVKKVIEVGLLCTQASAEIRPTMSELIILLQNKDLLENSKPTMPVLIEPN 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1280 627 ProSiteProfiles Gnk2-homologous domain profile. 147 251 IPR002902 -
Acco05g1280 627 FunFam Cysteine-rich receptor-like protein kinase 2 411 615 - -
Acco05g1280 627 Gene3D Phosphorylase Kinase; domain 1 308 410 - -
Acco05g1280 627 Gene3D Transferase(Phosphotransferase) domain 1 411 619 - -
Acco05g1280 627 Pfam Salt stress response/antifungal 168 248 IPR002902 -
Acco05g1280 627 Pfam Salt stress response/antifungal 49 135 IPR002902 -
Acco05g1280 627 CDD STKc_IRAK 340 604 - -
Acco05g1280 627 SUPERFAMILY Protein kinase-like (PK-like) 319 609 IPR011009 -
Acco05g1280 627 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Acco05g1280 627 Gene3D - 145 251 IPR038408 -
Acco05g1280 627 Gene3D - 33 138 IPR038408 -
Acco05g1280 627 FunFam Cysteine-rich receptor-like protein kinase 2 298 410 - -
Acco05g1280 627 ProSiteProfiles Gnk2-homologous domain profile. 33 139 IPR002902 -
Acco05g1280 627 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 625 - -
Acco05g1280 627 Pfam Protein kinase domain 335 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1280 627 ProSiteProfiles Protein kinase domain profile. 334 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1280 627 FunFam Cysteine-rich receptor-like protein kinase 2 148 251 - -
Acco05g1280 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Acco05g1280 627 SMART serkin_6 334 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1280 Acco-ChrAcco05 26608612 26615382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1280 7 611 Receptor kinase-like Gene Family AT1G70520 38.363 3.48e-120 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1280 Pkinase 8.9e-50 CL0016