Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1279 ATGCTTCAACCTTATTTCCTTCCTTTAATCACCTTCATCTTCTGGTTATGGTGGACGATTAACGGCGTCGTTTCGGACCCACAGATCAATCTTGTAAGCAAAGGGTGCACCCCATCTAACACATTCGTCTTGTCCAACTTCTCCATCTTCAGCGAGAATGTCAACAAAACGCTTCGGCATGTCAAAGAGGAGCTTCTCAACAAAAGCGAGCTGTTTGCGACTGCCCAGAACGCCAACGCAGAAAATCCAGTTTTCACTCTTTTTCAGTGCAGAAACTATCTCTCCGTTAATGATTGTGTTTCCTGCTTCAACGCCTCAGTCGAACAAGTCCTTGACTGCCCTGCCGGAGCACAAGGTGGCCGTGTCATCTACGACGGCTGTTTCCTCAGGTACGAGGCCAATGGTTTCTTTGGCGAGACAACGAAGAATTTCAATGCCGTTTCGTGTGGTGATCTAAGTGTAAGAGAATCATCAACCACATTATTTACGTCGGTTGTGCAACAAGTGCTAATGCATCTCCAAACAACAACACCCAAAAAGCAAGGGTTTGTCGTGGCGACAAAAGCACAATTATTGCCTCATAATAATGGTACAACTATTTATGCCTTTGCTCAATGTATTGAAACTATCACTCAGAGTGGGTGTGAAGAATGCTTGAAGGCTTGTAATAGTAATATGCAGATTTGTCTTCCTAATTCGGATGGTAAGGCCTTCGCTGCTGGATGCTTCATGAGATACTCCACCTCTTCCTTCTTTCCACATAATTACCAGACGATTGATATAACTCCCTTGGGGAAAAAAGGTTCAATCAATAAGGGGGCTATTGTTGGTGGAGTTGTTGGAGGTGCAGTTCTTGTTTTGGTCCTCCTTATACTATTTGTCTGTATTAGACGGCCAAAAAGCACTAAGAGGGTTCATAGAGGCCTAGGAGACATAATTAGAGCAACTAAGTTGAAAGGCCTTGTTACATATAGTTTTAAGGATTTGAAGTTTGCAACCGAGAATTTTAGTGAAGATAATAAACTAGGAGAAGGAGGATTTGGTGAAGTATACAAGGGAACCTTAAAGGATGGGAAAGAAGTAGCAGTGAAGAAGTTAACTTTACAAAACTCTAGGAGAATGGAGGAAAATTTTGAGAGTGAAGTGATGCTCATAAGTGATGCTCATCATCCAAATCTTGTTCAACTTTTGGGATGGAGCAGCAAAGGCCGTGTTAGAATCCTCGTTTATGAGTACATGAAAAACAACAGTCTTGACAAATTCTTATTTGGTCACATAAGGAAAGGTTATCTCAATTGGAAGCAACGATATGACATAATTTTAGGAATAGCAAGAGGTTTGACTTATCTCCATGAGGAATTTCATGTCCGTATCATACATAGAGATATAAAGACTAACAACATCCTCTTGGACAATAATTTACAACCTAGAATTGCTGATTTTGGATTGGCAAGACTCTTACCTGAGGATAGATCTCATCTTAGCACAAAATGTGCTGGAACATTAGGATACATGTCACCAGAGTATGCAATTCATGGTCAATTATCAGAGAAAGTTGATATCTACAGCTATGGTGTTGTAATTCTTGAAATCATTAGCGGTCAAAGAAGCAAAGCATCAAAGGATGATGGTGATACTGAAGATGAATTCCTCCTTCCAAAAGCTTGGAAACTATATGAGAAGGGCATGCACTTAGAGTTGGTGGACAATACCTTAGACCCTAATGAGTACGATGCCGAAGAAGTGAAGAAAGTCATAGAGATTGGTTTGCTTTGCACACAAGCATTTGCTGACTTAAGGCCAACGATGTCTGAAGTAATTGGTCTGCTCCAAAGCAGTAACCTATTAGAGAATATAATAAGACCTTCTATGCCTCTCTTGATTGTAACTAATTAG 1896 0.4066 MLQPYFLPLITFIFWLWWTINGVVSDPQINLVSKGCTPSNTFVLSNFSIFSENVNKTLRHVKEELLNKSELFATAQNANAENPVFTLFQCRNYLSVNDCVSCFNASVEQVLDCPAGAQGGRVIYDGCFLRYEANGFFGETTKNFNAVSCGDLSVRESSTTLFTSVVQQVLMHLQTTTPKKQGFVVATKAQLLPHNNGTTIYAFAQCIETITQSGCEECLKACNSNMQICLPNSDGKAFAAGCFMRYSTSSFFPHNYQTIDITPLGKKGSINKGAIVGGVVGGAVLVLVLLILFVCIRRPKSTKRVHRGLGDIIRATKLKGLVTYSFKDLKFATENFSEDNKLGEGGFGEVYKGTLKDGKEVAVKKLTLQNSRRMEENFESEVMLISDAHHPNLVQLLGWSSKGRVRILVYEYMKNNSLDKFLFGHIRKGYLNWKQRYDIILGIARGLTYLHEEFHVRIIHRDIKTNNILLDNNLQPRIADFGLARLLPEDRSHLSTKCAGTLGYMSPEYAIHGQLSEKVDIYSYGVVILEIISGQRSKASKDDGDTEDEFLLPKAWKLYEKGMHLELVDNTLDPNEYDAEEVKKVIEIGLLCTQAFADLRPTMSEVIGLLQSSNLLENIIRPSMPLLIVTN 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1279 631 ProSiteProfiles Gnk2-homologous domain profile. 30 136 IPR002902 -
Acco05g1279 631 Gene3D - 143 251 IPR038408 -
Acco05g1279 631 Gene3D - 29 136 IPR038408 -
Acco05g1279 631 FunFam Cysteine-rich receptor-like protein kinase 2 413 618 - -
Acco05g1279 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Acco05g1279 631 SMART serkin_6 336 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1279 631 CDD STKc_IRAK 342 611 - -
Acco05g1279 631 FunFam Cysteine-rich receptor-like protein kinase 2 301 412 - -
Acco05g1279 631 Pfam Salt stress response/antifungal 157 248 IPR002902 -
Acco05g1279 631 Pfam Salt stress response/antifungal 42 133 IPR002902 -
Acco05g1279 631 FunFam Cysteine-rich receptor-like protein kinase 3 145 251 - -
Acco05g1279 631 Gene3D Transferase(Phosphotransferase) domain 1 413 619 - -
Acco05g1279 631 Pfam Protein kinase domain 337 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1279 631 SUPERFAMILY Protein kinase-like (PK-like) 321 613 IPR011009 -
Acco05g1279 631 ProSiteProfiles Protein kinase domain profile. 336 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1279 631 ProSiteProfiles Gnk2-homologous domain profile. 143 251 IPR002902 -
Acco05g1279 631 Gene3D Phosphorylase Kinase; domain 1 311 412 - -
Acco05g1279 631 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Acco05g1279 631 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 87 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1279 Acco-ChrAcco05 26600095 26606305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1279 4 625 Receptor kinase-like Gene Family AT1G70520 36.493 1.56e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1279 Pkinase 6e-49 CL0016