Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1275 ATGCTTCTTCAACCTACTTTCCTTTCTGTAATCTCCTTCATATTCTGGTCACGTTGGACACTTAACGTCGTCGTTTCGGATCCACAGACCCATTTTATTACCGGACGGTGCTCCCCACCAGCCAACACAATCGCTTTGACCAACTCATCCATCTTCCATGATACCGTAAACGCAACGTTACGAGACATCAAAGAGAAGATCATCACTCAGAACAAGTACTTTGCGACGGCACGTGTATCCAACGCAGAAAACCCTGTTTCTACACTTTTTCAGTGTAGAAACTACATCTCCATTCCCGGCTGTGTATCCTGCTTAGACATCGCCGCCAACCAAACCCGCCGCTGCCCTCTGGCGGCACAAGGTGCCGATGTTATCTACGACGGCTGCTTCCTCAGGTACGAGACCACTGCTTTCTTTGAGAAGACAACGGAGGATTTCAATGCTGTATCGTGTGGTAATCAAACTGTAGGAGAATCCATTACTACATTTACCTCACTTGTGCAACAAGTTCTAAAGAACCTGCAAACAACAACACCCAAAAAACAAGGGTTTTTTGCAGCCACAAAGATAGAATTGCCTCATAAAAATAAGAGTACAACTATTTATGCCTTTGCTCAATGCATTGAAACTATCACTCAGGCGGGATGCTTCAATTGCTTGGACACTGGCTATAAAAATATGCAGACTTGTCTTCCAAATTCGGATGGTAGGGCTTATGCTGATGGGTGTTTCATGAGATACTCCACCTCTTCCTTCTTTCCTCATAATTACCAGATCATTGATTTCTCTTCGATGGGCAAACAAGGTTCAAGTAAACAGGGGGCCGTTATCGGTGGAGTTGTTGGAGGAGTTACTCTTATTATAATCCTCCTCGTATTATTTATCTGTATTAGACAATCAAAAAGCTCTAAGAGAGTTCACAGACTAGGGGACATAGCTATGACAACTATGTTGAAAGGCCTAGTTTCTTACGATTATAAGGATTTGAAGTTTGCAACTCAGAATTTTAGTGAAGAAACTAAACTAGGAGAAGGAGGATTTGGCGCCGTATACAAGGGCACTCTAAGAGATGGGAAAATAGTTGCAGTTAAGAAGTTAACTTTACAACACTCCAAGAAGATGGAGGAAGATTTTTTAAGTGAAGTGATGCTTATTAGTGATGTTCATCATCCGAATCTTATTCAACTTATGGGCTGGTGTTGTAAAGGCCATGTCAGAATCCTTGTATATGAATACATGAAAAACAACAGCCTGGACAAATTCTTATTTGGTGAAAAGAAAGGTTATCTTAACTGGAAGCAACGATATCATATAATTTTGGGGATAGCAAGAGGTTTAACTTATCTCCATGAGCAATTTCATGTTTGTATTATACACAGAGATATAAAGTCCAACAACATCCTCTTAGACAATGATCTACAACCTAGAATTGCTGATTTTGGATTGGCAAGGTTTTTACCTAAGGATAAATCTCATCTTAGCACAAAATTTGCAGGAACAATAGGATACACAGCACCAGAGTATGCAATTCATGGTCAATTATCAGAGAAAGCTGATATTTATAGTTATGGTATTGTAATCCTTGAAATCGTTACTGGTCAGAAAAACAAAGCATTTATGGATGATGGTGATACTGAAGATGAATTCCTCCTTCCAAAAGTTTGGAAACTATACGAGAGAGGAAAGCACTTAGAGTTGGTGGACAAAGCCTTAGACACTAATGACTACGATGCAGAAGAAGTGAAGAAAGTCATAGAAATTGGTTTGCTTTGCACACAAGCATTTGCTGACTTAAGGCCAACAATGTCTGAAGTGATTGATTTGCTCCAAAGCAATGGCTTATTAGAGCATATGAGACCCTCTATGCCTGTCTTAATTGTAACTAATTAG 1890 0.4 MLLQPTFLSVISFIFWSRWTLNVVVSDPQTHFITGRCSPPANTIALTNSSIFHDTVNATLRDIKEKIITQNKYFATARVSNAENPVSTLFQCRNYISIPGCVSCLDIAANQTRRCPLAAQGADVIYDGCFLRYETTAFFEKTTEDFNAVSCGNQTVGESITTFTSLVQQVLKNLQTTTPKKQGFFAATKIELPHKNKSTTIYAFAQCIETITQAGCFNCLDTGYKNMQTCLPNSDGRAYADGCFMRYSTSSFFPHNYQIIDFSSMGKQGSSKQGAVIGGVVGGVTLIIILLVLFICIRQSKSSKRVHRLGDIAMTTMLKGLVSYDYKDLKFATQNFSEETKLGEGGFGAVYKGTLRDGKIVAVKKLTLQHSKKMEEDFLSEVMLISDVHHPNLIQLMGWCCKGHVRILVYEYMKNNSLDKFLFGEKKGYLNWKQRYHIILGIARGLTYLHEQFHVCIIHRDIKSNNILLDNDLQPRIADFGLARFLPKDKSHLSTKFAGTIGYTAPEYAIHGQLSEKADIYSYGIVILEIVTGQKNKAFMDDGDTEDEFLLPKVWKLYERGKHLELVDKALDTNDYDAEEVKKVIEIGLLCTQAFADLRPTMSEVIDLLQSNGLLEHMRPSMPVLIVTN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1275 629 Gene3D Transferase(Phosphotransferase) domain 1 413 618 - -
Acco05g1275 629 Gene3D - 144 252 IPR038408 -
Acco05g1275 629 Gene3D - 33 138 IPR038408 -
Acco05g1275 629 Pfam Protein kinase domain 337 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1275 629 CDD STKc_IRAK 342 610 - -
Acco05g1275 629 Pfam Salt stress response/antifungal 158 249 IPR002902 -
Acco05g1275 629 Pfam Salt stress response/antifungal 47 135 IPR002902 -
Acco05g1275 629 SMART serkin_6 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1275 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Acco05g1275 629 Gene3D Phosphorylase Kinase; domain 1 297 412 - -
Acco05g1275 629 FunFam Cysteine-rich receptor-like protein kinase 2 413 617 - -
Acco05g1275 629 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Acco05g1275 629 SUPERFAMILY Protein kinase-like (PK-like) 314 609 IPR011009 -
Acco05g1275 629 ProSiteProfiles Gnk2-homologous domain profile. 144 252 IPR002902 -
Acco05g1275 629 ProSiteProfiles Protein kinase domain profile. 336 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1275 629 FunFam serine/threonine-protein kinase PBS1-like 302 412 - -
Acco05g1275 629 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 622 - -
Acco05g1275 629 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Acco05g1275 629 FunFam Cysteine-rich receptor-like protein kinase 2 146 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1275 Acco-ChrAcco05 26516434 26520932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1275 5 611 Receptor kinase-like Gene Family AT1G70520 35.955 2.24e-116 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1275 Pkinase 4.2e-51 CL0016