Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1274 ATGCTTCTGCATCCTAATCTCCTTACCTTGTTCATCTTCATATTCCGGTCATGCTGGATTATTAACCACGTCGTTTCGGACCCACAGACCAATCTTCTAAAGGTAGGGTGCAGCACACCCAACCAGTTCGTGGTGTCCAACTACACTATTTTCAATCAGAATCTAAACTTAACGTTGCAAGAAATCAGAGAGCAAATCAGTGATCCAAACAGGCACTTCGCCACTGCGCGAGAAGGAAATGGAGGAAACCCTATTTCCACTCTTTTTCAATGCAGAAACTATCTTTCCGTTGCTAATTGTGTCAGCTGCTTAGACGTCGCCGCCGCACAAATCCGCAACTGCTCCGCCGGGTCCTACGGTGGCCATGTCGTATATGATGGCTGCTTCCTCAGGTACGAGGCTGGTGATTTCTATGGCGAGACGACAGGGACTTTGACTAAACTATTGTGTGGAGATCAAAAAGCCAGAGAAGCCATGGAATTCACAGAAACTGCCAAAAAATTGCTAATGAATCTCTTAACGGCAACACCCACGATTCCTGGTTTCTCTGCAGCCACAAAGATACAAGTGGCTAATAATGGTGAAATTATTTATGCTTTTGCTCAATGTGTTGGCACTGTCACACAAAGTGGATGTCTGGATTGCTTAAAGACTGTGGATAGCAATATGCAGATTTGTCTTCCCAATTTAGAGGGTAAAGCTTTTGATGCTGGGTGTTTCATGAGATACTCCACCACTTCCTTCTTTCCTGATAACCAAACCATTGATATCATACCCTTGGTCAAATCAGGCTCATCAAGAAATAAGGGGATAATTATTGGCGGAGTTGTTGGAGTTCTAGCACTTGTTTTGATTCTTCTTGCATTATTTTCTTGGATAAGACGACCAAAAAGCCCCAAGAGAGTTCCTCCAGGAGATATAACTGAAACTAGTAAGTTGAAAGGCCCAATGACTTACAGTTATCAGGATTTGAAGTCTGCAACCAAAAATTTCAGTCATGAAAATAAACTAGGAGAAGGAGGATTTGGAACATTAGGTTATACAGCACCTGAATATATAATCCATGGCCAATTATCCGAGAAAGTTGATATATACAGCTATGGTGTTGTAATTTTGGAAATTATTAGTGGTAGAAAAAGTGAAGAACTAGGGGTTGATGGTGATGATGAAGGCGAATTTCTCCTTCAAAAGGCATGGAAACTATACGAGAGAGGCTTGCACATAGAGTTGGTGGACAATATCTTAAACCCCACTGACTATGATGAAGAGGAAGTGAAGAAAATCATAGAGATAGGTTTGCTTTGCACGCAGGCATCTCCTGCAATAAGGCCAACAATGTCTGAAGTTGTTGTTTTGCTGCAAAACAAGGGCTTATTAGAAAACTTAAGACCAACAATGCCCATCTTGGTTGACACTAACTAA 1422 0.4177 MLLHPNLLTLFIFIFRSCWIINHVVSDPQTNLLKVGCSTPNQFVVSNYTIFNQNLNLTLQEIREQISDPNRHFATAREGNGGNPISTLFQCRNYLSVANCVSCLDVAAAQIRNCSAGSYGGHVVYDGCFLRYEAGDFYGETTGTLTKLLCGDQKAREAMEFTETAKKLLMNLLTATPTIPGFSAATKIQVANNGEIIYAFAQCVGTVTQSGCLDCLKTVDSNMQICLPNLEGKAFDAGCFMRYSTTSFFPDNQTIDIIPLVKSGSSRNKGIIIGGVVGVLALVLILLALFSWIRRPKSPKRVPPGDITETSKLKGPMTYSYQDLKSATKNFSHENKLGEGGFGTLGYTAPEYIIHGQLSEKVDIYSYGVVILEIISGRKSEELGVDGDDEGEFLLQKAWKLYERGLHIELVDNILNPTDYDEEEVKKIIEIGLLCTQASPAIRPTMSEVVVLLQNKGLLENLRPTMPILVDTN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1274 473 Pfam Protein tyrosine and serine/threonine kinase 339 451 IPR001245 GO:0004672|GO:0006468
Acco05g1274 473 ProSiteProfiles Gnk2-homologous domain profile. 31 137 IPR002902 -
Acco05g1274 473 Gene3D Transferase(Phosphotransferase) domain 1 318 461 - -
Acco05g1274 473 SUPERFAMILY Protein kinase-like (PK-like) 343 454 IPR011009 -
Acco05g1274 473 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Acco05g1274 473 FunFam Cysteine-rich receptor-like protein kinase 2 145 248 - -
Acco05g1274 473 Pfam Salt stress response/antifungal 43 133 IPR002902 -
Acco05g1274 473 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Acco05g1274 473 Gene3D - 142 248 IPR038408 -
Acco05g1274 473 Gene3D - 30 137 IPR038408 -
Acco05g1274 473 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1274 Acco-ChrAcco05 26481815 26486648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1274 79 345 Receptor kinase-like Gene Family AT1G70530 28.986 1.21e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1274 PK_Tyr_Ser-Thr 1.2e-07 CL0016