Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1272 ATGAAGACAAAAGTGCCTAATAATAATGGTACAATTATATATGCCTATGCTCAATGTATTGAAACAATCTCACAAAGTGGATGCTCGAGTTGCTTAAGCGCTACGTCTAGCAATATGCCAACTTGTCTTCCTAGTTCAGATGGTAGGGCTTATGCTGATGGCTGTTTCATGAGATTCTCCACTTCTTCCTTCTTTCCTGATAACCAGACCATGGATATCACTCCCTTGAAAAAACAAGGTTCAAGCAAGAAAGGGTCCATTATTGGTGGAGCTGTTGGAGGTGTAGCTTTTCTTTTTGTACTTCTTGCATTATTTGCCTGGATCAGACGACCAAAAACCCTTAAGCAAGTTCCGAGAGGAGAGATAACGGGAGCAAGCAAGTTAGCCCGCCCAGTTACTTACAGTTATAAGGATTTGAAGTTTGCAACCAAAAATTTTAGTGAAGAAAATAAAGTTGGAGAAGGAGGGTTTGGCGCTGTATACAAGGGTACTCTGAAAAATGGGAAAGTGGTTGCAATCAAGAAATTAAATTTTCGCCAATTCACGAGGATGGAGGAAGATTTTGAGAGTGAAGTGAAACTGATAAGAACATTGGGATACACGGCACCTGAATATCTTATTCATGGCCAATTATCAGAGAAGGTTGATGTCTATAGTTATGGCGTTGTAGTCTTGGAGATTGTCAGTGGTCGACAAAGTAAAGAATTAACCATCGATGGTGATGCTGAGGGTGAATTCCTCCTTCAAAAAGCTTGGAAGTTATATGACAGAGGCATGCACCTAGAGTTGGTGGACAATAGCTTAGACCCTACTGAGTATGATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGCATCTCCTGAAGCAAGACCAATGATGTCTGAAGTAATTGTTTTGCTCCAAAACAAGGATTTATTAGAGAATATGAAGCCCACTATGCCTATCTTGATTGAAACTTGA 978 0.4008 MKTKVPNNNGTIIYAYAQCIETISQSGCSSCLSATSSNMPTCLPSSDGRAYADGCFMRFSTSSFFPDNQTMDITPLKKQGSSKKGSIIGGAVGGVAFLFVLLALFAWIRRPKTLKQVPRGEITGASKLARPVTYSYKDLKFATKNFSEENKVGEGGFGAVYKGTLKNGKVVAIKKLNFRQFTRMEEDFESEVKLIRTLGYTAPEYLIHGQLSEKVDVYSYGVVVLEIVSGRQSKELTIDGDAEGEFLLQKAWKLYDRGMHLELVDNSLDPTEYDAEEVKKIIEIGLLCTQASPEARPMMSEVIVLLQNKDLLENMKPTMPILIET 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1272 325 Pfam Salt stress response/antifungal 9 61 IPR002902 -
Acco05g1272 325 Gene3D Phosphorylase Kinase; domain 1 120 197 - -
Acco05g1272 325 ProSiteProfiles Protein kinase domain profile. 146 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1272 325 Gene3D Transferase(Phosphotransferase) domain 1 198 320 - -
Acco05g1272 325 Pfam Protein tyrosine and serine/threonine kinase 200 304 IPR001245 GO:0004672|GO:0006468
Acco05g1272 325 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 196 323 - -
Acco05g1272 325 ProSiteProfiles Gnk2-homologous domain profile. 1 64 IPR002902 -
Acco05g1272 325 SUPERFAMILY Protein kinase-like (PK-like) 143 308 IPR011009 -
Acco05g1272 325 SMART tyrkin_6 146 306 IPR020635 GO:0004713|GO:0006468
Acco05g1272 325 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Acco05g1272 325 Gene3D - 1 64 IPR038408 -
Acco05g1272 325 CDD TM_EGFR-like 81 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1272 Acco-ChrAcco05 26442631 26445605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1272 4 73 Receptor kinase-like Gene Family AT1G70530 29.333 2.48e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1272 PK_Tyr_Ser-Thr 4.5e-08 CL0016