Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1269 ATGCAACAAAAACCTTTCTTCTTCTTATTGTTGAGCTTCATAATATGGTCATGGTGGACACTCGACGGCGTCGTGTCAGACCCACAGACCAATTACGTGAAGATAGGGTGCAGCCAATACAACGTCACAGACACAGGAATCTTCCATGATAACCTGAAGATAACTTTCAGAAACTTGAAAACACAGATCAAGAACCAAAGCAAACACTTTGCTACGTCTCAGGCAGTGAAGGGGAACAACCCAGCTTATAGTCTTTTTCAGTGCAGAAACTACCTCTCCATCTCCGACTGCCTTGCTTGCTTCCGAATCGCGGCCCGGAATATTCGCAACTGTTCCTACGGCGCCACCGGTGCTCGTATCATCTATGAAGGATGCTTCCTGAGGTACGAGAGCAGTGGCTTCTTTGACCAGAACACAGACGCAGGCAACAACATTGTGTGTGGGAATAAACCAAGAAACTCCACTGCACTTGCTTCAACTGTAGAGCAAGTGCTCAATAATCTGGAAATTGCAACACCGAAAATACAAAATTTCTATGCAGCAACCAAAACACAAGTGCCTAATAGTAACACTTCAATTTATGCCTTTGCTCAATGCCTTGAAACCCTCACTCCAAGTAGCTGCCAAGATTGCTTGAAGACTGGCTTAAAAAATTTTCAGATATGTCTTCCCAACTCAAATGCAAAGATTTATGATGCTGGTTGTTTCATGAGATACTCCACGACTGCCTTCTTTGCTGATTATCAAACCACTAACATCAAGAATTTCTTGAAACAAGGAGGAGGTTCAACGAAGAAGAAGGCTATTATTGGTGGAGTCGTGGGAGGCGCCTCTGTTATTTTGATTCTTCTTGCATTATTTGCCTTGTATGGACGATCACAGTTATCCAAAAGGGATCCTAGAGGTGACATTTTGGGAGCAACTGAGTTGAAAGGCCCTGTTAACTACAGGTATAAAGATCTAAAGGCAGCCACAAAAAATTTCAATAAAGAAAATAAACTAGGAGAAGGAGGTTTTGGCGATGTTTATAAGGGCACTTTGAAGAATGGAAAAGTAGTTGCTGTCAAGAAATTGGCTTTAGACCAATCCAAAGAGATGGAGAAAAATTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCAGAATCTTGTTCGGCTTTTGGGGTGTTGCAGCAAAGGGCAAGAGAGACTCCTAGTTTATGAGTATATGAAAAACAACAATGTTGGCCAATATTTATTCGGTAAAAATAAAGGTTCTCTCAGTTGGAAGCTACGTTATGGTGTAATTTTGGGCATTGCAAGGGGTTTGGCCTATCTACATGAGGAATTTCATGTTTGTATCATACATAGAGATATAAAAACTAGCAACATCCTTTTGGATGATGATTTCCAAGCTAAAATTGCTGATTTTGGACTAGCAAGGCTTTTGCCAAGAGACCAATCTCACCTCAACACAAGATTTGCAGGAACAATGGGATACACAGCACCTGAATATGCAATGCATGGACAATTATCAGAGAAGGCTGACACTTATAGTTATGGAGTTGTAGTCCTAGAAATCATAAGCGGACAAAAGAGTGGCGAATTGAAGGTTAATAATGAAAGTGAATTACTCCTTCAAAAGGCTTGGAAGCTATACGAAAGAGGAATGCACATAGAGTTTGTGGACAAAAACTTAGATCCAAATGAGTATGATGCAGAAGAAGTGAAGAAAATAATAGAGATTGGATTGCTTTGCACGCAATCATCTCCTGCAGCGAGGCCAACAATGTCTGAGATTGTTGTTATGCTCAAAAGCAAGGGCTTAATGGAGAACAAGAAACCCACTATGCCTGCCTATGTTGATCCTAATTGGAGTCCCAAAAGAGACAATTCTACTTCTAAAAGTTCATATTCATCAAATGCTACTGTATCCCAGTCCGTTCTATCAGGAAGGTGA 1944 0.4069 MQQKPFFFLLLSFIIWSWWTLDGVVSDPQTNYVKIGCSQYNVTDTGIFHDNLKITFRNLKTQIKNQSKHFATSQAVKGNNPAYSLFQCRNYLSISDCLACFRIAARNIRNCSYGATGARIIYEGCFLRYESSGFFDQNTDAGNNIVCGNKPRNSTALASTVEQVLNNLEIATPKIQNFYAATKTQVPNSNTSIYAFAQCLETLTPSSCQDCLKTGLKNFQICLPNSNAKIYDAGCFMRYSTTAFFADYQTTNIKNFLKQGGGSTKKKAIIGGVVGGASVILILLALFALYGRSQLSKRDPRGDILGATELKGPVNYRYKDLKAATKNFNKENKLGEGGFGDVYKGTLKNGKVVAVKKLALDQSKEMEKNFESEVKLISNVHHQNLVRLLGCCSKGQERLLVYEYMKNNNVGQYLFGKNKGSLSWKLRYGVILGIARGLAYLHEEFHVCIIHRDIKTSNILLDDDFQAKIADFGLARLLPRDQSHLNTRFAGTMGYTAPEYAMHGQLSEKADTYSYGVVVLEIISGQKSGELKVNNESELLLQKAWKLYERGMHIEFVDKNLDPNEYDAEEVKKIIEIGLLCTQSSPAARPTMSEIVVMLKSKGLMENKKPTMPAYVDPNWSPKRDNSTSKSSYSSNATVSQSVLSGR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1269 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Acco05g1269 647 SMART serkin_6 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1269 647 FunFam Cysteine-rich receptor-like protein kinase 2 142 244 - -
Acco05g1269 647 Pfam Protein tyrosine and serine/threonine kinase 330 598 IPR001245 GO:0004672|GO:0006468
Acco05g1269 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 632 - -
Acco05g1269 647 CDD STKc_IRAK 334 600 - -
Acco05g1269 647 Gene3D Transferase(Phosphotransferase) domain 1 405 614 - -
Acco05g1269 647 FunFam Cysteine-rich receptor-like protein kinase 2 296 404 - -
Acco05g1269 647 SUPERFAMILY Protein kinase-like (PK-like) 309 599 IPR011009 -
Acco05g1269 647 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Acco05g1269 647 MobiDBLite consensus disorder prediction 608 647 - -
Acco05g1269 647 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Acco05g1269 647 Pfam Salt stress response/antifungal 152 241 IPR002902 -
Acco05g1269 647 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Acco05g1269 647 Gene3D - 29 134 IPR038408 -
Acco05g1269 647 Gene3D - 143 244 IPR038408 -
Acco05g1269 647 MobiDBLite consensus disorder prediction 621 647 - -
Acco05g1269 647 Gene3D Phosphorylase Kinase; domain 1 305 404 - -
Acco05g1269 647 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Acco05g1269 647 FunFam Cysteine-rich receptor-like protein kinase 2 405 607 - -
Acco05g1269 647 ProSiteProfiles Protein kinase domain profile. 328 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1269 Acco-ChrAcco05 26281799 26290008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1269 1 647 Receptor kinase-like Gene Family AT1G70520 36.787 3.79e-134 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1269 PK_Tyr_Ser-Thr 9.2e-52 CL0016