Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1264 ATGTTTAAACATTCTTATCACCTTGCCTTGTTTACTCTCATATTTGGGTCATGCGGTGTTCTTAACGGCGTTGTTTCAGACCCACAGTCCCATCTTCTTACCATTGGCTGCACTCCATTCGACCCTTTCGTCATTTCTGATTTGCCTGTCTTCAATAACAACCTAAACGCAACGTTTCGGGACATCAGAGAACAGGTTAGAGACCAAAACAAGCACTTCGCCACGGTTCAGGAAAGTGGTGGAGGAAGCCCCGTATCCACTCTTTTTCAATGCAGAAACTACCTCTCCATCACTGACTGTCTCGCTTGCTTCGATGTAACCGCCGTGAAAATCCGAAGCTGCCCCACCGGTGCCCCTGGTGGCCATGTTGTCTATGACGGCTGCTTCCTCAGGTATGATGCGAGTTCTTTCTTTGACCGAGCAACGGATACTTTCAATGCTGCATTGTGTGGGAATACAACTACAGGAGAAGCCACTGCATTTACCACAGCTGTCCAAAAACTGCTCATGAATCTCCAAAACAAAGTATCAATAATCACCGGTTTTTCCGCAGCCACAAAGACACAAGTGCCTAATAATGGTTCAACTATATATGCTTTTGTTCAGTGTACAGAAACTGTAACACAAAGCGGATGCCTCAATTGCTTAAGTGTTGGATACAGAAATATACAGACTTGTCTTCCCACTTCAGATGGTAGAGCTTTTGACCAAGGTTGCTTCATGAGATACTCCACAACTTCCTTCTTTCCTCAAAATTACCAGATCAATGTTGTTCTCACTCCCACGGATGATAAACACGGTTCAAGCAATGAAGGGGCCATCTTTGGTGGAGTTATTGGAGGAATATTACTTGTTTTTATTGTCCTTGCACTTTTTCTCTGGATTAGACCACCAAAAAGCCCTAAAAGAGTTCCGGCTGGAGGAGACATAACTGGTGCAAGCAAGTTGAAAGGTGCAATTAATTACATTTACATGGATTTGAAGTATGCAACAAAAAATTTTAGTGCAGAAAATAAACTTGGAGAAGGAGGATTTGGTGCAGTGTATAAGGGAACTCTGAAGAACGGGAAAGTAGTTGCAGTTAAGAAATTAACTTTACGTCACTCCAATAAAGTGGAGGAAGAGTTTGAAAGTGAAGTGAAGCTGATATGTAATGTTCATCATCGGAATCTTGTTCGACTTCTTGGATATTGTAGTAAAGGAAGTGAGAGAATTCTTGTTTATGAATACATGAAAAACACCAGCCTTGACAAATTCTTATTTGGTAAAATGAAAGGTTCCCTTGGATGGAGGCAAAGCACGAGATTTGCAGGAACACTAGGATATGCAGCACCAGAGTATGCAATAAATGGCCAATTATCTGAGAAAGTTGATATATATAGCTACGGTGTTGTAATCCTTGAAATTATTAGCGGTCAAAAAAGTGAAGAATTGAATACCAATGGTGAAGCTGAAGGTGAATTCCTCCTCCAAAAGGCATGGAAACTATATGAAAGAGGCATGCATTTGGAGTTGGTGGACAATACTTTAGACCCAAATGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATCGGTTTGCTTTGCACCCAATCATCTGCTGCAGTAAGGCCGACAATATCTGAAGTTATTGTCTTGCTCCAAAACAAGGGCTCATTTGAAAATATGAGACCAACTATGCCTTTCTTAGTTGAAACTAAATAA 1707 0.4107 MFKHSYHLALFTLIFGSCGVLNGVVSDPQSHLLTIGCTPFDPFVISDLPVFNNNLNATFRDIREQVRDQNKHFATVQESGGGSPVSTLFQCRNYLSITDCLACFDVTAVKIRSCPTGAPGGHVVYDGCFLRYDASSFFDRATDTFNAALCGNTTTGEATAFTTAVQKLLMNLQNKVSIITGFSAATKTQVPNNGSTIYAFVQCTETVTQSGCLNCLSVGYRNIQTCLPTSDGRAFDQGCFMRYSTTSFFPQNYQINVVLTPTDDKHGSSNEGAIFGGVIGGILLVFIVLALFLWIRPPKSPKRVPAGGDITGASKLKGAINYIYMDLKYATKNFSAENKLGEGGFGAVYKGTLKNGKVVAVKKLTLRHSNKVEEEFESEVKLICNVHHRNLVRLLGYCSKGSERILVYEYMKNTSLDKFLFGKMKGSLGWRQSTRFAGTLGYAAPEYAINGQLSEKVDIYSYGVVILEIISGQKSEELNTNGEAEGEFLLQKAWKLYERGMHLELVDNTLDPNEYDAEEVKKIIEIGLLCTQSSAAVRPTISEVIVLLQNKGSFENMRPTMPFLVETK 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1264 568 ProSiteProfiles Protein kinase domain profile. 334 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1264 568 Gene3D - 142 248 IPR038408 -
Acco05g1264 568 Gene3D - 44 137 IPR038408 -
Acco05g1264 568 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Acco05g1264 568 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Acco05g1264 568 Pfam Salt stress response/antifungal 150 245 IPR002902 -
Acco05g1264 568 Pfam Salt stress response/antifungal 50 133 IPR002902 -
Acco05g1264 568 FunFam Cysteine-rich receptor-like protein kinase 2 302 410 - -
Acco05g1264 568 SUPERFAMILY Protein kinase-like (PK-like) 320 553 IPR011009 -
Acco05g1264 568 Pfam Protein tyrosine and serine/threonine kinase 336 436 IPR001245 GO:0004672|GO:0006468
Acco05g1264 568 Pfam Protein tyrosine and serine/threonine kinase 440 546 IPR001245 GO:0004672|GO:0006468
Acco05g1264 568 Gene3D Transferase(Phosphotransferase) domain 1 411 559 - -
Acco05g1264 568 Gene3D Phosphorylase Kinase; domain 1 310 410 - -
Acco05g1264 568 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Acco05g1264 568 FunFam Cysteine-rich receptor-like protein kinase 2 145 248 - -
Acco05g1264 568 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Acco05g1264 568 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1264 Acco-ChrAcco05 26133809 26140544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1264 91 567 Receptor kinase-like Gene Family AT4G21410 28.993 2.47e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1264 PK_Tyr_Ser-Thr 8.1e-06 CL0016