Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1261 ATGGTACTGCGGCACCAGCAACAAAAACCCTTCTTCTTCATCTTGTTGAGCTTCACAATCTGGTCATGGGGGACTCTCGACGACGTCGTTTCAGAGCCTCAGACGGTTCTTGTGACATTAGGATGCAGCCTAGTCAACGTCAGTGATGCGTCCATCTTCCAAGACAATCTAAACACAACGTTTCGATCCATGAGAACGAAGATCAGCAATCAAAGCACACACTTCGCCACGGAGCAGGTAGTGAGGGGGAACAACCCTACTTATGGCCTTTTTCAGTGCAGAAACTACCTCTCCACCGCCGACTGTCTCACTTGCTTCGACGTCGCTGACAACAAGATCCGACACAACTGCTCCGCCGCCTCCAACGGTGCCCACATCATATACGACGGTTGCTTCCTCAGGTACGAGAGCAGCAGCTTTTTTGAGCAGTCGACAGATCCAGTGAACAACATTCATTGTGGGAATGAAACAAGAAATTCCACTGAACTTGCTTCAACTGTACAACAAGTACTAAAGAATCTGGAATTATCAACTCCAATAATCACTGGTTACTTTGCAGCTACTAAAACGACAGTGCCTAACAGTAATGGTTCAAACATTTATGCCTTTGCTCAATGTGTTGAGTCCCTCACACCAAGTGGTTGTGACAATTGCTTGAACATTGCCATAAGGAATTTCCAGATTTGTCTCCCAAATTCAGATGCTAAGGCTTTTGATTTTGGGTGCTTCATGAGATACTCCACCACGGCCTTCTTTGCTGATAATCAAACCATTGACATCAATCACTTCTTGAATCAAGGAGATTCAAGCAAGAAGAAGGCCATTATTGGTGGAGTTGTTGGAGGAGCATCTTTTATATTGATTCTCCTTGCATTAATTGCTTTGTATATGCGATCACAGTCATCCAAGATGGTTCCTAAAGGCGACATTTTGGGAGCAACTGAATTGAAAGGTCCTGTTAACTTTAGGTATAAGGATCTAAAGTCAGCGACAAAAAATTTCAGCGAAACAAATAAAATAGGAGAAGAAGGTTTCGGTGATGTATACAAGGGTACCCTAAAGAATGGAAAAGTAGTTGCTATCAAGAAATTGGATTTAGGGCAATCCAAACAGATGGAGAAAGATTTTGAGAGTGAAGTGAAGTTGATCAGTAATGTTCATCATCGGAATATTATTCGGCTTCTGGGATGTTGCAGTAAAGGCCAAGAGAGATTTCTTGTTTATGAGCACATGAAAAACAACAATGTAGGACAATTCTTGTGTGGTGAAAATAAAGGTTCTCTCAGTTGGATGCAACGTTATGGGATAATTTTAGGCACTGCAAGAGGTTTGGCATATCTACATGAGGAATTTCATGTCCGTATCATACATAGAGATGTAAAAATTAGCAACATCCTTCTGGATGATGATTTCCAGCCTAAAATTGCTGACTTTGGATTGGCAAAGCTTTTGCCAAGAGACCAATCTCATATCAATACACAATTTGCTGGAACCACGGGATATGTAGCACCTGAATATGCCATGCACGGACAATTATCAGAGAAAGTTGATACTTACAGCTATGGTGTAGTTGTCCTAGAAATCATAAGCGGACAAAAGAGTAGTAATGCATCGAAGGTCAATGATAAAGGCGAATACCTCCTTCAAAGAGCTTGGAAACTATACGAGAGAGGAATGCACCAAGAGTTTGTGGATGAAACCTTAGACCCAAATGAGTATGATGCGGAAGAAGTAAAGAAAATCATAGAGATTGCTTTGCTTTGCACACAAGCATCTCCAGCATCAAGGCCAAGAATGTCTGAAATTGTAAGAATGCTCAAAAGAAAGAGCTTAATGGAACACAAAGTGCCCACTATGCCTGTCTATGTTGATCCAAGTTCTTGGCCTAAAAAAGAAGACAACTCTGACATTTCATCTTCATCAAATGCTACTGTTTCCATTTCCATCCTATCAGGAAGGTGA 1962 0.4159 MVLRHQQQKPFFFILLSFTIWSWGTLDDVVSEPQTVLVTLGCSLVNVSDASIFQDNLNTTFRSMRTKISNQSTHFATEQVVRGNNPTYGLFQCRNYLSTADCLTCFDVADNKIRHNCSAASNGAHIIYDGCFLRYESSSFFEQSTDPVNNIHCGNETRNSTELASTVQQVLKNLELSTPIITGYFAATKTTVPNSNGSNIYAFAQCVESLTPSGCDNCLNIAIRNFQICLPNSDAKAFDFGCFMRYSTTAFFADNQTIDINHFLNQGDSSKKKAIIGGVVGGASFILILLALIALYMRSQSSKMVPKGDILGATELKGPVNFRYKDLKSATKNFSETNKIGEEGFGDVYKGTLKNGKVVAIKKLDLGQSKQMEKDFESEVKLISNVHHRNIIRLLGCCSKGQERFLVYEHMKNNNVGQFLCGENKGSLSWMQRYGIILGTARGLAYLHEEFHVRIIHRDVKISNILLDDDFQPKIADFGLAKLLPRDQSHINTQFAGTTGYVAPEYAMHGQLSEKVDTYSYGVVVLEIISGQKSSNASKVNDKGEYLLQRAWKLYERGMHQEFVDETLDPNEYDAEEVKKIIEIALLCTQASPASRPRMSEIVRMLKRKSLMEHKVPTMPVYVDPSSWPKKEDNSDISSSSNATVSISILSGR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1261 653 FunFam Cysteine-rich receptor-like protein kinase 2 300 410 - -
Acco05g1261 653 FunFam Cysteine-rich receptor-like protein kinase 2 411 614 - -
Acco05g1261 653 Pfam Protein kinase domain 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1261 653 Gene3D - 147 251 IPR038408 -
Acco05g1261 653 Gene3D - 34 140 IPR038408 -
Acco05g1261 653 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Acco05g1261 653 SUPERFAMILY Protein kinase-like (PK-like) 317 606 IPR011009 -
Acco05g1261 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 636 - -
Acco05g1261 653 ProSiteProfiles Protein kinase domain profile. 334 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1261 653 MobiDBLite consensus disorder prediction 624 653 - -
Acco05g1261 653 CDD STKc_IRAK 340 608 - -
Acco05g1261 653 MobiDBLite consensus disorder prediction 632 653 - -
Acco05g1261 653 Gene3D Transferase(Phosphotransferase) domain 1 411 619 - -
Acco05g1261 653 Pfam Salt stress response/antifungal 158 248 IPR002902 -
Acco05g1261 653 Pfam Salt stress response/antifungal 42 137 IPR002902 -
Acco05g1261 653 FunFam Cysteine-rich receptor-like protein kinase 2 148 251 - -
Acco05g1261 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Acco05g1261 653 SMART serkin_6 334 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1261 653 Gene3D Phosphorylase Kinase; domain 1 298 410 - -
Acco05g1261 653 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1261 Acco-ChrAcco05 25969463 25974293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1261 10 653 Receptor kinase-like Gene Family AT1G70520 35.401 3.91e-128 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1261 Pkinase 1e-48 CL0016