Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1259 ATGCAGTCACAACTGCAACAAAAGCCTCTCTTCTTCTTCATCTTCTTGAACTTCATAGTCTGGTCATGGTGGACACGTGACGGTGTCGTTTCAGATCCTCAGACCAATCTGGTGCAGCTATGGTGTGACCAGAACGGTGACAACGATGGATCGATCATGAAGGAGATACTAAGCGAAACGTTTGGAGGCCTCAGAGCTCAGATCAAAGACCAAAACAAACATTTCGCCACAGCTCAAGCAGTGAGGGCTAACATGCCCGTTTTTGGCCTTTTTCAGTGCAGAAACTATCTCTCCGTTGCCGACTGCCTCGCTTGCTTCGACGTCGCCGCTGTAAACATCCGCAAATGCTCCGACCAGGCATACGGTTCCCGTCTTGTCTACGATGGCTGCTTCCTCAGGTACGAGAGCAGTCAACAATATGATCTTGCCAGCGAAACTTGGGCCAACGTAAGATGCGGGAATCAGACAATAAGAGATTCCTCAACGCTTACTTCAACTGTCCAACAAGCGTTAACGAATCTAAACACAGCAACACCAAAAATGGCTAGTTTTTATGCAGCCACTAAAACGCCTGTGCCTAATAGTAATAATGGTTTGAACATTTATGCGATTGCTCAATGTGTTGGGACTCTCTCACAAAGTGGGTGTCAGAATTGCATCAACTCTGCGTCAGGAAGATTTCAGACTTGTCTTACAAACTCAAATGCTGAGAGTTACGATACTGGCTGCTTCATGAGATACTCCACCTCTTCCTTTTTTGCTGATAATCAAACCACAGATATTAACCCCTTCTTGAAACAGCAAGGTTCATCAAGCAACAATAATAAGGGGGTCATCATTGGTATTGTTATTGGATGTGTAGTGTTTGTTTTGATCCTCCTTGTTGCGCTATTTATCTGGATTAGACCACGAAAAAGCATAAAGAGGGTTCCTAGAGGAGACATGACGGGAATCAGCACGTTGAAAGCCCCAGTTAATTACAATTATAGGGATTTAAAGTATGCAACAAAAAATTTCAGTTCTGAAAATAAACTTGGAGAAGGAGGGTTTGGTTCAGTTTATAAGGGCACTCTGAAGAATGGGAAAGTAGTTGCAGTGAAGAAATTAACTATACGACAATCGAAGAGGATGGAGGAAGAATTTGAGAGTGAAGTGAGGCTTATAAGTAATGTTCGTCATCGCAATCTTGTTCGACTACTTGGATGTTGCAGTAAAGGCAAGACGAGGATTCTGGTCTACGAATACATGGAAAAGACCAGTCTTGACAGATTTTTATTTGGAAAAAAGAAAGGTTCTCTTAATTGGAAGCAACGATACGATATAATTTTAGGAACATCTAGAGGTTTGACTTATCTACATGAGGAATTTCATGTTCGCATCATACATAGAGATATCAAGACTAACAACATCCTGTTAGATGATGATTTGCAACCTAAAATTGCTGATTTTGGTTTAGCAAGGCTCTTACCAGAGGACAAGTCTCATCTTAGCACAAGATTTGCAGGAACATTAGGATATACAGCACCAGAATATGCAATTCATGGCCAACTATCAGAAAAAGTTGATGTCTATAGCTACGGTGTTGTAGTCCTAGAAATCATCAGTGGTCGAAGAAACAATGAATTAAGCATCGCTGGTGCTGCTGAAGGCGAGTTCCTCCTTCAAAAAGCATGGAAACTATATCAAAGAGGCACGCACTTAAACTTGGTGGATGATACATTAGACCCTAATGAGTATGTTGAAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGTACACAAGCATCTGCAGAAATCAGGCCAACAATGTCTCAAGTAGTTGGTTTGCTACAACAGAAAGGTTTAGCTGAGGATATAAGGCCCACTATGCCTCTTTTGATTGAAATTGATTAG 1899 0.4155 MQSQLQQKPLFFFIFLNFIVWSWWTRDGVVSDPQTNLVQLWCDQNGDNDGSIMKEILSETFGGLRAQIKDQNKHFATAQAVRANMPVFGLFQCRNYLSVADCLACFDVAAVNIRKCSDQAYGSRLVYDGCFLRYESSQQYDLASETWANVRCGNQTIRDSSTLTSTVQQALTNLNTATPKMASFYAATKTPVPNSNNGLNIYAIAQCVGTLSQSGCQNCINSASGRFQTCLTNSNAESYDTGCFMRYSTSSFFADNQTTDINPFLKQQGSSSNNNKGVIIGIVIGCVVFVLILLVALFIWIRPRKSIKRVPRGDMTGISTLKAPVNYNYRDLKYATKNFSSENKLGEGGFGSVYKGTLKNGKVVAVKKLTIRQSKRMEEEFESEVRLISNVRHRNLVRLLGCCSKGKTRILVYEYMEKTSLDRFLFGKKKGSLNWKQRYDIILGTSRGLTYLHEEFHVRIIHRDIKTNNILLDDDLQPKIADFGLARLLPEDKSHLSTRFAGTLGYTAPEYAIHGQLSEKVDVYSYGVVVLEIISGRRNNELSIAGAAEGEFLLQKAWKLYQRGTHLNLVDDTLDPNEYVEEEVKKIIEIGLLCTQASAEIRPTMSQVVGLLQQKGLAEDIRPTMPLLIEID 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1259 632 ProSiteProfiles Protein kinase domain profile. 339 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1259 632 Gene3D - 144 252 IPR038408 -
Acco05g1259 632 Gene3D - 34 138 IPR038408 -
Acco05g1259 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Acco05g1259 632 Pfam Salt stress response/antifungal 55 136 IPR002902 -
Acco05g1259 632 Pfam Salt stress response/antifungal 155 249 IPR002902 -
Acco05g1259 632 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 626 - -
Acco05g1259 632 FunFam Cysteine-rich receptor-like protein kinase 2 306 415 - -
Acco05g1259 632 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Acco05g1259 632 CDD TM_EGFR-like 279 309 - -
Acco05g1259 632 ProSiteProfiles Gnk2-homologous domain profile. 35 139 IPR002902 -
Acco05g1259 632 Gene3D Transferase(Phosphotransferase) domain 1 416 621 - -
Acco05g1259 632 Gene3D Phosphorylase Kinase; domain 1 306 415 - -
Acco05g1259 632 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Acco05g1259 632 Pfam Protein kinase domain 340 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1259 632 SUPERFAMILY Protein kinase-like (PK-like) 320 612 IPR011009 -
Acco05g1259 632 FunFam Cysteine-rich receptor-like protein kinase 2 416 620 - -
Acco05g1259 632 CDD STKc_IRAK 345 614 - -
Acco05g1259 632 SMART serkin_6 339 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1259 Acco-ChrAcco05 25947574 25951540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1259 9 623 Receptor kinase-like Gene Family AT1G70520 36.699 1.26e-121 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g1259 Pkinase 2.9e-51 CL0016